Difference between revisions of "TSS:Hg 107372.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=124 |entrez_id=196051 |gc_percent=0.80597 |gene_alias=DPPL2|PPAPDC1|PPAPDC1A |gene_description=phospholipid phosphatase 4 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PPAPDC1= | ||
| + | |PPAPDC1A= | ||
| + | |all_trans=BC101267:-3 BC101269:-3 BC122535:-3 BC101268:-3 BC132787:49 ENST00000398250.5:-120 NM_001318166:-120 NM_001318167:-120 NM_001318168:-120 NM_001318169:-120 NM_001030059:-120 NR_134516:-120 uc001lev.1:-120 ENST00000427079.5:140 uc057wjl.1:140 AK296273:165 HQ258170:219 KJ895775:219 KJ903972:219 AK310178:221 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-3 | ||
|distance_to_tss=124 | |distance_to_tss=124 | ||
| + | |end=120457082 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=DPPL2|PPAPDC1|PPAPDC1A | |gene_alias=DPPL2|PPAPDC1|PPAPDC1A | ||
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
| − | |gene_name=PLPP4 | + | |gene_id=196051 |
| + | |gene_name=phospholipid phosphatase 4 | ||
| + | |gene_source=HGNC:23531 | ||
| + | |gene_symbol=PLPP4 | ||
| + | |gene_synonyms=DPPL2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
|nearest_promoter_id=NM_001318169 | |nearest_promoter_id=NM_001318169 | ||
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=120457073 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC101267 BC101269 BC122535 BC101268 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107372.1 | |tss_id=hg_107372.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:58, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC101267 BC101269 BC122535 BC101268 |
|---|---|
| Distance: | -3 |
| Num_trans: | 20 |
| All_trans: | BC101267:-3 BC101269:-3 BC122535:-3 BC101268:-3 BC132787:49 ENST00000398250.5:-120 NM_001318166:-120 NM_001318167:-120 NM_001318168:-120 NM_001318169:-120 NM_001030059:-120 NR_134516:-120 uc001lev.1:-120 ENST00000427079.5:140 uc057wjl.1:140 AK296273:165 HQ258170:219 KJ895775:219 KJ903972:219 AK310178:221 |
TATA-Box annotation
| Distance to TSS: | 124 |
|---|---|
| Nearest PromoterID: | NM_001318169 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2 |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
