Difference between revisions of "TSS:Hg 114542.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK292704:-13 ENST00000545320 | + | |all_trans=AK292704:-13 ENST00000545320.1:-28 ENST00000344931.9:-32 X60992:-32 ENST00000545105.5:-40 ENST00000542254.5:-42 BC033755:-53 BC078669:-76 KJ896561:83 ENST00000542157.5:84 ENST00000433107.6:84 ENST00000352009.9:84 ENST00000452451.6:84 DQ786329:84 DQ786330:84 U66142:84 U66145:84 U66146:84 ENST00000313421.11:-98 NR_045638:-98 NM_001254751:-98 NM_001254750:-98 NM_006725:-98 AK312749:-98 AK128419:-98 LP895219:-104 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-13 | |distance=-13 | ||
| − | |distance_to_tss= | + | |distance_to_tss=100 |
|end=60971782 | |end=60971782 | ||
|end_of_center_position=60971780 | |end_of_center_position=60971780 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:1691 | |hgnc_mgi_id=HGNC:1691 | ||
|nearest_ensembl=ENSG00000013725 | |nearest_ensembl=ENSG00000013725 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_045638 |
|nearest_refseq=NM_006725 | |nearest_refseq=NM_006725 | ||
|nearest_unigene=Hs.744366 | |nearest_unigene=Hs.744366 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=60971777 | |start=60971777 | ||
Revision as of 21:45, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60971779 |
|---|---|
| End of the center position in the TSS region: | 60971780 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK292704 |
|---|---|
| Distance: | -13 |
| Num_trans: | 26 |
| All_trans: | AK292704:-13 ENST00000545320.1:-28 ENST00000344931.9:-32 X60992:-32 ENST00000545105.5:-40 ENST00000542254.5:-42 BC033755:-53 BC078669:-76 KJ896561:83 ENST00000542157.5:84 ENST00000433107.6:84 ENST00000352009.9:84 ENST00000452451.6:84 DQ786329:84 DQ786330:84 U66142:84 U66145:84 U66146:84 ENST00000313421.11:-98 NR_045638:-98 NM_001254751:-98 NM_001254750:-98 NM_006725:-98 AK312749:-98 AK128419:-98 LP895219:-104 |
TATA-Box annotation
| Distance to TSS: | 100 |
|---|---|
| Nearest PromoterID: | NR_045638 |
| Entrez ID: | 923 |
| Nearest Unigene: | Hs.744366 |
| Nearest Refseq: | NM_006725 |
| Nearest Ensembl: | ENSG00000013725 |
| Gene Name: | CD6 molecule |
| Gene Alias: | TP120 |
| Gene Description: | CD6 molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
