Difference between revisions of "TSS:Hg 154456.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SMAP-8= | ||
| + | |SMAP8= | ||
|all_trans=ENST00000258187.9:0 uc002enk.4:0 NM_020465:-19 ENST00000569404.5:22 uc059vav.1:22 ENST00000569539.5:28 uc059vaw.1:28 ENST00000564126.5:31 uc059vax.1:31 ENST00000562764.5:-33 uc059vau.1:-33 ENST00000562725.5:34 uc059vay.1:34 ENST00000565304.5:41 uc059vaz.1:41 ENST00000567667.5:43 uc059vba.1:43 AB021172:63 ENST00000564207.5:-294 uc059vat.1:-294 ENST00000394282.8:342 uc002enm.4:342 NM_001130487:408 | |all_trans=ENST00000258187.9:0 uc002enk.4:0 NM_020465:-19 ENST00000569404.5:22 uc059vav.1:22 ENST00000569539.5:28 uc059vaw.1:28 ENST00000564126.5:31 uc059vax.1:31 ENST00000562764.5:-33 uc059vau.1:-33 ENST00000562725.5:34 uc059vay.1:34 ENST00000565304.5:41 uc059vaz.1:41 ENST00000567667.5:43 uc059vba.1:43 AB021172:63 ENST00000564207.5:-294 uc059vat.1:-294 ENST00000394282.8:342 uc002enm.4:342 NM_001130487:408 | ||
|chr=chr16 | |chr=chr16 | ||
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|distance_to_tss=28 | |distance_to_tss=28 | ||
|end=58463682 | |end=58463682 | ||
| + | |end_of_center_position=58463673 | ||
|entrez_id=65009 | |entrez_id=65009 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=BDM1 | + | |gene_alias=BDM1 |
|gene_description=NDRG family member 4 | |gene_description=NDRG family member 4 | ||
|gene_id=65009 | |gene_id=65009 | ||
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|species=human | |species=human | ||
|start=58463663 | |start=58463663 | ||
| + | |start_of_center_position=58463672 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000258187.9 uc002enk.4 | |transcript_name=ENST00000258187.9 uc002enk.4 | ||
Revision as of 19:58, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 58463672 |
|---|---|
| End of the center position in the TSS region: | 58463673 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000258187.9 uc002enk.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000258187.9:0 uc002enk.4:0 NM_020465:-19 ENST00000569404.5:22 uc059vav.1:22 ENST00000569539.5:28 uc059vaw.1:28 ENST00000564126.5:31 uc059vax.1:31 ENST00000562764.5:-33 uc059vau.1:-33 ENST00000562725.5:34 uc059vay.1:34 ENST00000565304.5:41 uc059vaz.1:41 ENST00000567667.5:43 uc059vba.1:43 AB021172:63 ENST00000564207.5:-294 uc059vat.1:-294 ENST00000394282.8:342 uc002enm.4:342 NM_001130487:408 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_020465 |
| Entrez ID: | 65009 |
| Nearest Unigene: | Hs.322430 |
| Nearest Refseq: | NM_020465 |
| Nearest Ensembl: | ENSG00000103034 |
| Gene Name: | NDRG family member 4 |
| Gene Alias: | BDM1 |
| Gene Description: | NDRG family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
