Difference between revisions of "TSS:Hg 121146.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NUMA= | |NUMA= | ||
| − | |all_trans=ENST00000358965.10:0 ENST00000537217.5:0 ENST00000540843.5:0 ENST00000543937.5:0 ENST00000368959.9:0 ENST00000366394.7:0 ENST00000541641.5:0 ENST00000537905.5:0 ENST00000546131.1:0 | + | |all_trans=ENST00000358965.10:0 ENST00000393695.8:0 ENST00000537217.5:0 ENST00000540843.5:0 ENST00000543937.5:0 ENST00000368959.9:0 ENST00000366394.7:0 ENST00000541641.5:0 ENST00000537905.5:0 ENST00000546131.1:0 NM_006185:0 NR_104476:0 AB210007:0 Z11584:0 Z11583:0 AK307577:0 BC103765:0 BC027493:0 BC043499:0 AB621824:0 ENST00000535111.5:10 ENST00000541719.5:42 ENST00000351960.10:84 BC004165:84 BC068539:-133 ENST00000613205.4:-134 ENST00000543450.1:-134 NM_001286561:-134 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=26 |
|end=72080559 | |end=72080559 | ||
|end_of_center_position=72080516 | |end_of_center_position=72080516 | ||
|entrez_id=4926 | |entrez_id=4926 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=NMP-22 | + | |gene_alias=NMP-22{{!}}NUMA |
|gene_description=nuclear mitotic apparatus protein 1 | |gene_description=nuclear mitotic apparatus protein 1 | ||
|gene_id=4926 | |gene_id=4926 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006185 | |nearest_refseq=NM_006185 | ||
|nearest_unigene=Hs.325978 | |nearest_unigene=Hs.325978 | ||
| − | |num_trans= | + | |num_trans=28 |
|species=human | |species=human | ||
|start=72080472 | |start=72080472 | ||
|start_of_center_position=72080515 | |start_of_center_position=72080515 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000358965.10 ENST00000537217.5 ENST00000540843.5 ENST00000543937.5 ENST00000368959.9 ENST00000366394.7 ENST00000541641.5 ENST00000537905.5 ENST00000546131.1 NR_104476 | + | |transcript_name=ENST00000358965.10 ENST00000393695.8 ENST00000537217.5 ENST00000540843.5 ENST00000543937.5 ENST00000368959.9 ENST00000366394.7 ENST00000541641.5 ENST00000537905.5 ENST00000546131.1 NM_006185 NR_104476 AB210007 Z11584 Z11583 AK307577 BC103765 BC027493 BC043499 AB621824 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_121146.1 | |tss_id=hg_121146.1 | ||
Revision as of 00:18, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72080515 |
|---|---|
| End of the center position in the TSS region: | 72080516 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000358965.10 ENST00000393695.8 ENST00000537217.5 ENST00000540843.5 ENST00000543937.5 ENST00000368959.9 ENST00000366394.7 ENST00000541641.5 ENST00000537905.5 ENST00000546131.1 NM_006185 NR_104476 AB210007 Z11584 Z11583 AK307577 BC103765 BC027493 BC043499 AB621824 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENST00000358965.10:0 ENST00000393695.8:0 ENST00000537217.5:0 ENST00000540843.5:0 ENST00000543937.5:0 ENST00000368959.9:0 ENST00000366394.7:0 ENST00000541641.5:0 ENST00000537905.5:0 ENST00000546131.1:0 NM_006185:0 NR_104476:0 AB210007:0 Z11584:0 Z11583:0 AK307577:0 BC103765:0 BC027493:0 BC043499:0 AB621824:0 ENST00000535111.5:10 ENST00000541719.5:42 ENST00000351960.10:84 BC004165:84 BC068539:-133 ENST00000613205.4:-134 ENST00000543450.1:-134 NM_001286561:-134 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NR_104476 |
| Entrez ID: | 4926 |
| Nearest Unigene: | Hs.325978 |
| Nearest Refseq: | NM_006185 |
| Nearest Ensembl: | ENSG00000137497 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | NMP-22|NUMA |
| Gene Description: | nuclear mitotic apparatus protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
