Difference between revisions of "TSS:Hg 121801.1"
From referenceTSS
| Line 2: | Line 2: | ||
|KOX-1= | |KOX-1= | ||
|RENOX= | |RENOX= | ||
| − | |all_trans= | + | |all_trans=LP764880:15 LP764881:15 AB041035:15 ENST00000393282.2:-52 BC051371:-52 ENST00000525278.1:106 ENST00000263317.9:125 NM_001291926:125 NM_016931:125 NM_001143836:125 NR_120406:125 ENST00000525196.5:140 BC034780:140 ENST00000529343.5:143 AF254621:168 ENST00000534731.5:172 ENST00000527626.5:172 AK291830:172 AK298376:172 BC040105:182 AK311389:207 JF432404:250 KJ893751:250 CU691812:251 ENST00000531342.5:254 ENST00000375979.7:254 AF261943:254 AJ704725:254 AJ704726:254 AJ704727:254 AJ704728:254 AJ704729:254 AY288918:254 ENST00000343727.9:369 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 11: | Line 11: | ||
|entrez_id=50507 | |entrez_id=50507 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=KOX | + | |gene_alias=KOX{{!}}KOX-1{{!}}RENOX |
|gene_description=NADPH oxidase 4 | |gene_description=NADPH oxidase 4 | ||
|gene_id=50507 | |gene_id=50507 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:7891 | |hgnc_mgi_id=HGNC:7891 | ||
|nearest_ensembl=ENSG00000086991 | |nearest_ensembl=ENSG00000086991 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_120406 |
|nearest_refseq=NM_016931 | |nearest_refseq=NM_016931 | ||
|nearest_unigene=Hs.371036 | |nearest_unigene=Hs.371036 | ||
| − | |num_trans= | + | |num_trans=34 |
|species=human | |species=human | ||
|start=89491499 | |start=89491499 | ||
|start_of_center_position=89491506 | |start_of_center_position=89491506 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LP764880 LP764881 AB041035 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_121801.1 | |tss_id=hg_121801.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 00:33, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89491506 |
|---|---|
| End of the center position in the TSS region: | 89491507 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LP764880 LP764881 AB041035 |
|---|---|
| Distance: | 15 |
| Num_trans: | 34 |
| All_trans: | LP764880:15 LP764881:15 AB041035:15 ENST00000393282.2:-52 BC051371:-52 ENST00000525278.1:106 ENST00000263317.9:125 NM_001291926:125 NM_016931:125 NM_001143836:125 NR_120406:125 ENST00000525196.5:140 BC034780:140 ENST00000529343.5:143 AF254621:168 ENST00000534731.5:172 ENST00000527626.5:172 AK291830:172 AK298376:172 BC040105:182 AK311389:207 JF432404:250 KJ893751:250 CU691812:251 ENST00000531342.5:254 ENST00000375979.7:254 AF261943:254 AJ704725:254 AJ704726:254 AJ704727:254 AJ704728:254 AJ704729:254 AY288918:254 ENST00000343727.9:369 |
TATA-Box annotation
| Distance to TSS: | 59 |
|---|---|
| Nearest PromoterID: | NR_120406 |
| Entrez ID: | 50507 |
| Nearest Unigene: | Hs.371036 |
| Nearest Refseq: | NM_016931 |
| Nearest Ensembl: | ENSG00000086991 |
| Gene Name: | NADPH oxidase 4 |
| Gene Alias: | KOX|KOX-1|RENOX |
| Gene Description: | NADPH oxidase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
