Difference between revisions of "TSS:Hg 10056.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=74 |entrez_id=79707 |gc_percent=0.721393 |gene_alias=Grc3|NET6 |gene_description=nucleolar protein 9 |gene_name=NOL9 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NET6= | ||
| + | |all_trans=ENST00000377705.5:0 uc001ans.4:0 AK091284:0 AK289653:0 BC110849:0 HQ258631:3 KJ899555:3 KJ901072:3 ENST00000464665.1:6 uc057bvl.1:6 NM_024654:-56 BC105095:-56 BC112278:-56 BC143646:-56 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=74 | |distance_to_tss=74 | ||
| + | |end=6554542 | ||
|entrez_id=79707 | |entrez_id=79707 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=Grc3|NET6 | |gene_alias=Grc3|NET6 | ||
|gene_description=nucleolar protein 9 | |gene_description=nucleolar protein 9 | ||
| − | |gene_name=NOL9 | + | |gene_id=79707 |
| + | |gene_name=nucleolar protein 9 | ||
| + | |gene_source=HGNC:26265 | ||
| + | |gene_symbol=NOL9 | ||
| + | |gene_synonyms=FLJ23323 Grc3 NET6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26265 | ||
|nearest_ensembl=ENSG00000162408 | |nearest_ensembl=ENSG00000162408 | ||
|nearest_promoter_id=NM_024654 | |nearest_promoter_id=NM_024654 | ||
|nearest_refseq=NM_024654 | |nearest_refseq=NM_024654 | ||
|nearest_unigene=Hs.59425 | |nearest_unigene=Hs.59425 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=6554505 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377705.5 uc001ans.4 AK091284 AK289653 BC110849 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10056.1 | |tss_id=hg_10056.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SY16 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377705.5 uc001ans.4 AK091284 AK289653 BC110849 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000377705.5:0 uc001ans.4:0 AK091284:0 AK289653:0 BC110849:0 HQ258631:3 KJ899555:3 KJ901072:3 ENST00000464665.1:6 uc057bvl.1:6 NM_024654:-56 BC105095:-56 BC112278:-56 BC143646:-56 |
TATA-Box annotation
| Distance to TSS: | 74 |
|---|---|
| Nearest PromoterID: | NM_024654 |
| Entrez ID: | 79707 |
| Nearest Unigene: | Hs.59425 |
| Nearest Refseq: | NM_024654 |
| Nearest Ensembl: | ENSG00000162408 |
| Gene Name: | nucleolar protein 9 |
| Gene Alias: | Grc3 |
| Gene Description: | nucleolar protein 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
