Difference between revisions of "TSS:Hg 159721.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000577514.5:144 uc060bur.1:144 ENST00000395806.5:359 ENST00000395807.2:359 ENST00000395811.9:359 NM_201274:359 NM_015134:359 uc060bus.1:359 uc060b...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRIP= | ||
| + | |RHOIP3= | ||
| + | |RIP3= | ||
|all_trans=ENST00000577514.5:144 uc060bur.1:144 ENST00000395806.5:359 ENST00000395807.2:359 ENST00000395811.9:359 NM_201274:359 NM_015134:359 uc060bus.1:359 uc060but.1:359 uc002gqv.2:359 KF724384:359 BC136479:368 AB098507:392 AB384537:446 ENST00000341712.8:448 uc002gqu.3:448 AY296247:448 AB189741:448 | |all_trans=ENST00000577514.5:144 uc060bur.1:144 ENST00000395806.5:359 ENST00000395807.2:359 ENST00000395811.9:359 NM_201274:359 NM_015134:359 uc060bus.1:359 uc060but.1:359 uc002gqv.2:359 KF724384:359 BC136479:368 AB098507:392 AB384537:446 ENST00000341712.8:448 uc002gqu.3:448 AY296247:448 AB189741:448 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-363 | |distance_to_tss=-363 | ||
|end=17042401 | |end=17042401 | ||
| + | |end_of_center_position=17042397 | ||
|entrez_id=23164 | |entrez_id=23164 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=M-RIP | + | |gene_alias=M-RIP |
|gene_description=myosin phosphatase Rho interacting protein | |gene_description=myosin phosphatase Rho interacting protein | ||
|gene_id=23164 | |gene_id=23164 | ||
| Line 22: | Line 26: | ||
|nearest_unigene=Hs.462341 | |nearest_unigene=Hs.462341 | ||
|num_trans=18 | |num_trans=18 | ||
| + | |p116Rip= | ||
|species=human | |species=human | ||
|start=17042392 | |start=17042392 | ||
| + | |start_of_center_position=17042396 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000577514.5 uc060bur.1 | |transcript_name=ENST00000577514.5 uc060bur.1 | ||
Revision as of 00:26, 15 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17042396 |
|---|---|
| End of the center position in the TSS region: | 17042397 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000577514.5 uc060bur.1 |
|---|---|
| Distance: | 144 |
| Num_trans: | 18 |
| All_trans: | ENST00000577514.5:144 uc060bur.1:144 ENST00000395806.5:359 ENST00000395807.2:359 ENST00000395811.9:359 NM_201274:359 NM_015134:359 uc060bus.1:359 uc060but.1:359 uc002gqv.2:359 KF724384:359 BC136479:368 AB098507:392 AB384537:446 ENST00000341712.8:448 uc002gqu.3:448 AY296247:448 AB189741:448 |
TATA-Box annotation
| Distance to TSS: | -363 |
|---|---|
| Nearest PromoterID: | NM_201274 |
| Entrez ID: | 23164 |
| Nearest Unigene: | Hs.462341 |
| Nearest Refseq: | NM_015134 |
| Nearest Ensembl: | ENSG00000133030 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | M-RIP |
| Gene Description: | myosin phosphatase Rho interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
