Difference between revisions of "TSS:Hg 52009.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK289662:42 ENST00000503806.5 | + | |all_trans=AK289662:42 NM_001377151:44 ENST00000503806.5:-266 ENST00000356504.5:-282 AK125179:-282 ENST00000514090.5:-284 ENST00000506961.5:-285 NM_001114175:-312 NM_001330690:-312 NM_001377147:-312 NM_001377153:-312 NM_001377150:-312 NM_001377149:-312 NM_001377148:-312 ENST00000510233.5:366 ENST00000507069.5:366 ENST00000513005.5:366 ENST00000509716.2:366 AB384913:373 JF432507:373 KJ901438:373 KU178081:373 KU178082:373 KU178083:373 KU178084:373 KU178085:373 ENST00000507460.1:-453 AK307128:-453 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 12: | Line 12: | ||
|gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | |gene_description=gamma-aminobutyric acid type A receptor alpha2 subunit | ||
|gene_id=2555 | |gene_id=2555 | ||
| − | |gene_name=gamma-aminobutyric acid type A receptor alpha2 | + | |gene_name=gamma-aminobutyric acid type A receptor subunit alpha2 |
|gene_source=HGNC:4076 | |gene_source=HGNC:4076 | ||
|gene_symbol=GABRA2 | |gene_symbol=GABRA2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000807 | |nearest_refseq=NM_000807 | ||
|nearest_unigene=Hs.48372 | |nearest_unigene=Hs.48372 | ||
| − | |num_trans= | + | |num_trans=28 |
|species=human | |species=human | ||
|start=46389078 | |start=46389078 | ||
Revision as of 03:38, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 46389087 |
|---|---|
| End of the center position in the TSS region: | 46389088 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK289662 |
|---|---|
| Distance: | 42 |
| Num_trans: | 28 |
| All_trans: | AK289662:42 NM_001377151:44 ENST00000503806.5:-266 ENST00000356504.5:-282 AK125179:-282 ENST00000514090.5:-284 ENST00000506961.5:-285 NM_001114175:-312 NM_001330690:-312 NM_001377147:-312 NM_001377153:-312 NM_001377150:-312 NM_001377149:-312 NM_001377148:-312 ENST00000510233.5:366 ENST00000507069.5:366 ENST00000513005.5:366 ENST00000509716.2:366 AB384913:373 JF432507:373 KJ901438:373 KU178081:373 KU178082:373 KU178083:373 KU178084:373 KU178085:373 ENST00000507460.1:-453 AK307128:-453 |
TATA-Box annotation
| Distance to TSS: | 291 |
|---|---|
| Nearest PromoterID: | NM_001114175 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor subunit alpha2 |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
