Personal tools

Difference between revisions of "TSS:Hg 134770.1"

From referenceTSS

Jump to: navigation, search
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK301897:-7 ENST00000440264.5:-41 uc010abp.4:-41 NM_001111046:-114 NM_001111047:-114 NM_003914:312 NM_001111045:312 AK314261:312 ENST00000255465.6:398 uc001uvr.5:398 ENST00000630422.2:-424 uc010teo.3:-424 AK316392:-424
+
|all_trans=AK301897:-7 ENST00000440264.5:-41 NM_001111046:-114 NM_001111047:-114 NM_001111045:312 AK314261:312 ENST00000630422.2:-424 AK316392:-424
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 19: Line 19:
 
|hgnc_mgi_id=HGNC:1577
 
|hgnc_mgi_id=HGNC:1577
 
|nearest_ensembl=ENSG00000133101
 
|nearest_ensembl=ENSG00000133101
|nearest_promoter_id=NM_001111046
+
|nearest_promoter_id=NM_001111047
 
|nearest_refseq=NM_003914
 
|nearest_refseq=NM_003914
 
|nearest_unigene=Hs.417050
 
|nearest_unigene=Hs.417050
|num_trans=13
+
|num_trans=8
 
|species=human
 
|species=human
 
|start=36431943
 
|start=36431943

Revision as of 05:36, 16 June 2021

Basic information about the TSS


TSS ID:hg_134770.1
Species:human
Chr:chr13
TSS Classification:yes
Start:36431943
End:36431960
Strand:+
TSS Score:1
Start of the center position in the TSS region:36431951
End of the center position in the TSS region:36431952



Gene and protein annotation


Transcript_name:AK301897
Distance:-7
GeneID:8900
HGNC/MGI_ID:HGNC:1577
UniProt_ID:
Gene_name:cyclin A1
Gene_symbol:CCNA1
Gene_synonyms:CT146
Gene_source:HGNC:1577



Transcript annotation


Transcript_name:AK301897
Distance:-7
Num_trans:8
All_trans:AK301897:-7 ENST00000440264.5:-41 NM_001111046:-114 NM_001111047:-114 NM_001111045:312 AK314261:312 ENST00000630422.2:-424 AK316392:-424



TATA-Box annotation


Distance to TSS:122
Nearest PromoterID:NM_001111047
Entrez ID:8900
Nearest Unigene:Hs.417050
Nearest Refseq:NM_003914
Nearest Ensembl:ENSG00000133101
Gene Name:cyclin A1
Gene Alias:CT146
Gene Description:cyclin A1
Gene Type:protein-coding
CpG%:0.11
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):