Difference between revisions of "TSS:Mm 130087.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000049968. | + | |all_trans=ENSMUST00000049968.8:-79 NM_001013022:-79 BC087962:-79 ENSMUST00000228111.1:-107 ENSMUST00000227854.1:162 ENSMUST00000228005.1:176 ENSMUST00000227834.1:240 AK008010:240 BC037508:286 ENSMUST00000226267.1:303 ENSMUST00000238996.1:-412 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001013022 | |nearest_refseq=NM_001013022 | ||
|nearest_unigene=Mm.247273 | |nearest_unigene=Mm.247273 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=89379164 | |start=89379164 | ||
|start_of_center_position=89379169 | |start_of_center_position=89379169 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000049968. | + | |transcript_name=ENSMUST00000049968.8 NM_001013022 BC087962 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_130087.1 | |tss_id=mm_130087.1 | ||
Revision as of 03:52, 20 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 89379169 |
|---|---|
| End of the center position in the TSS region: | 89379170 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000049968.8 NM_001013022 BC087962 |
|---|---|
| Distance: | -79 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000049968.8:-79 NM_001013022:-79 BC087962:-79 ENSMUST00000228111.1:-107 ENSMUST00000227854.1:162 ENSMUST00000228005.1:176 ENSMUST00000227834.1:240 AK008010:240 BC037508:286 ENSMUST00000226267.1:303 ENSMUST00000238996.1:-412 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_001013022 |
| Entrez ID: | 70113 |
| Nearest Unigene: | Mm.247273 |
| Nearest Refseq: | NM_001013022 |
| Nearest Ensembl: | ENSMUSG00000047394 |
| Gene Name: | outer dense fiber of sperm tails 3B |
| Gene Alias: | 2010001J22Rik |
| Gene Description: | outer dense fiber of sperm tails 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
