Difference between revisions of "TSS:Hg 137941.1"
From referenceTSS
| Line 4: | Line 4: | ||
|STE20= | |STE20= | ||
|STK3= | |STK3= | ||
| − | |all_trans=BC035578:4 BC065378:4 EU668350:-27 ENST00000397517.6 | + | |all_trans=ENST00000539966.6:0 NM_001032296:0 BC035578:4 BC065378:4 EU668350:-27 LF385021:-27 MA620598:-27 ENST00000397517.6:-36 NM_001286649:-36 AK299140:231 AK297583:233 AF024636:235 KJ897844:309 KJ905348:309 DQ890912:309 AB590338:309 CU690112:312 BT019619:313 CR542227:313 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=44 | |distance_to_tss=44 | ||
|end=98577115 | |end=98577115 | ||
| Line 13: | Line 13: | ||
|entrez_id=8428 | |entrez_id=8428 | ||
|gc_percent=0.870647 | |gc_percent=0.870647 | ||
| − | |gene_alias=HEL-S-95 | + | |gene_alias=HEL-S-95{{!}}MST3{{!}}MST3B{{!}}STE20{{!}}STK3 |
|gene_description=serine/threonine kinase 24 | |gene_description=serine/threonine kinase 24 | ||
|gene_id=8428 | |gene_id=8428 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:11403 | |hgnc_mgi_id=HGNC:11403 | ||
|nearest_ensembl=ENSG00000102572 | |nearest_ensembl=ENSG00000102572 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001032296 |
|nearest_refseq=NM_003576 | |nearest_refseq=NM_003576 | ||
|nearest_unigene=Hs.508514 | |nearest_unigene=Hs.508514 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=98577106 | |start_of_center_position=98577106 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000539966.6 NM_001032296 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_137941.1 | |tss_id=hg_137941.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5U0E6 Q9Y6E0 |
}} | }} | ||
Revision as of 06:49, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98577106 |
|---|---|
| End of the center position in the TSS region: | 98577107 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000539966.6 NM_001032296 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000539966.6:0 NM_001032296:0 BC035578:4 BC065378:4 EU668350:-27 LF385021:-27 MA620598:-27 ENST00000397517.6:-36 NM_001286649:-36 AK299140:231 AK297583:233 AF024636:235 KJ897844:309 KJ905348:309 DQ890912:309 AB590338:309 CU690112:312 BT019619:313 CR542227:313 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_001032296 |
| Entrez ID: | 8428 |
| Nearest Unigene: | Hs.508514 |
| Nearest Refseq: | NM_003576 |
| Nearest Ensembl: | ENSG00000102572 |
| Gene Name: | serine/threonine kinase 24 |
| Gene Alias: | HEL-S-95|MST3|MST3B|STE20|STK3 |
| Gene Description: | serine/threonine kinase 24 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
