Difference between revisions of "TSS:Hg 137942.1"
From referenceTSS
| Line 4: | Line 4: | ||
|STE20= | |STE20= | ||
|STK3= | |STK3= | ||
| − | |all_trans=ENST00000397517.6:0 | + | |all_trans=ENST00000397517.6:0 NM_001286649:0 EU668350:0 LF385021:0 MA620598:0 ENST00000539966.6:34 NM_001032296:34 BC035578:46 BC065378:46 AK299140:273 AK297583:275 AF024636:277 KJ897844:351 KJ905348:351 DQ890912:351 AB590338:351 CU690112:354 BT019619:355 CR542227:355 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 13: | Line 13: | ||
|entrez_id=8428 | |entrez_id=8428 | ||
|gc_percent=0.865672 | |gc_percent=0.865672 | ||
| − | |gene_alias=HEL-S-95 | + | |gene_alias=HEL-S-95{{!}}MST3{{!}}MST3B{{!}}STE20{{!}}STK3 |
|gene_description=serine/threonine kinase 24 | |gene_description=serine/threonine kinase 24 | ||
|gene_id=8428 | |gene_id=8428 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:11403 | |hgnc_mgi_id=HGNC:11403 | ||
|nearest_ensembl=ENSG00000102572 | |nearest_ensembl=ENSG00000102572 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001032296 |
|nearest_refseq=NM_003576 | |nearest_refseq=NM_003576 | ||
|nearest_unigene=Hs.508514 | |nearest_unigene=Hs.508514 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=98577148 | |start_of_center_position=98577148 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000397517.6 | + | |transcript_name=ENST00000397517.6 NM_001286649 EU668350 LF385021 MA620598 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_137942.1 | |tss_id=hg_137942.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DR80 | + | |uniprot_id=B4DR80 |
}} | }} | ||
Revision as of 06:49, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98577148 |
|---|---|
| End of the center position in the TSS region: | 98577149 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000397517.6 NM_001286649 EU668350 LF385021 MA620598 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000397517.6:0 NM_001286649:0 EU668350:0 LF385021:0 MA620598:0 ENST00000539966.6:34 NM_001032296:34 BC035578:46 BC065378:46 AK299140:273 AK297583:275 AF024636:277 KJ897844:351 KJ905348:351 DQ890912:351 AB590338:351 CU690112:354 BT019619:355 CR542227:355 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001032296 |
| Entrez ID: | 8428 |
| Nearest Unigene: | Hs.508514 |
| Nearest Refseq: | NM_003576 |
| Nearest Ensembl: | ENSG00000102572 |
| Gene Name: | serine/threonine kinase 24 |
| Gene Alias: | HEL-S-95|MST3|MST3B|STE20|STK3 |
| Gene Description: | serine/threonine kinase 24 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.865672 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
