Difference between revisions of "TSS:Mm 135315.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Cdgap= | |Cdgap= | ||
|D330026I07Rik= | |D330026I07Rik= | ||
| − | |all_trans=ENSMUST00000023487.4:81 AK138417:81 AK136348:100 NM_020260 | + | |all_trans=ENSMUST00000023487.4:81 AK138417:81 AK136348:100 NM_020260:320 ENSMUST00000124866.1:456 AK018057:456 ENSMUST00000132697.1:457 AK045213:457 AK149975:485 AK150109:485 AK155729:500 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 12: | Line 12: | ||
|entrez_id=12549 | |entrez_id=12549 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=5830477L08Rik | + | |gene_alias=5830477L08Rik{{!}}AU041750{{!}}Cdgap{{!}}D330026I07Rik |
|gene_description=Rho GTPase activating protein 31 | |gene_description=Rho GTPase activating protein 31 | ||
|gene_id=12549 | |gene_id=12549 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_020260 | |nearest_refseq=NM_020260 | ||
|nearest_unigene=Mm.370848 | |nearest_unigene=Mm.370848 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=38713354 | |start=38713354 | ||
Revision as of 05:55, 20 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 38713358 |
|---|---|
| End of the center position in the TSS region: | 38713359 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000023487.4 AK138417 |
|---|---|
| Distance: | 81 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000023487.4:81 AK138417:81 AK136348:100 NM_020260:320 ENSMUST00000124866.1:456 AK018057:456 ENSMUST00000132697.1:457 AK045213:457 AK149975:485 AK150109:485 AK155729:500 |
TATA-Box annotation
| Distance to TSS: | -324 |
|---|---|
| Nearest PromoterID: | NM_020260 |
| Entrez ID: | 12549 |
| Nearest Unigene: | Mm.370848 |
| Nearest Refseq: | NM_020260 |
| Nearest Ensembl: | ENSMUSG00000022799 |
| Gene Name: | Rho GTPase activating protein 31 |
| Gene Alias: | 5830477L08Rik|AU041750|Cdgap|D330026I07Rik |
| Gene Description: | Rho GTPase activating protein 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
