Difference between revisions of "TSS:Hg 235018.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000392557.8:66 NM_145685:75 AJ297407:75 AJ297406:-471 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=66 |
|distance_to_tss=16377 | |distance_to_tss=16377 | ||
|end=98848461 | |end=98848461 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=DOCK9 antisense RNA 1 | |gene_description=DOCK9 antisense RNA 1 | ||
| − | |gene_id= | + | |gene_id=2972 |
| − | |gene_name= | + | |gene_name=ZFP36 ring finger protein like 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:1107 |
| − | |gene_symbol= | + | |gene_symbol=ZFP36L1 |
| − | |gene_synonyms= | + | |gene_synonyms=Berg36 ERF1 RNF162B TIS11B cMG1 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:1107 |
|nearest_ensembl=ENSG00000229918 | |nearest_ensembl=ENSG00000229918 | ||
|nearest_promoter_id=NR_046663 | |nearest_promoter_id=NR_046663 | ||
|nearest_refseq=NR_046663 | |nearest_refseq=NR_046663 | ||
|nearest_unigene=Hs.578066 | |nearest_unigene=Hs.578066 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=98848460 | |start=98848460 | ||
|start_of_center_position=105247959 | |start_of_center_position=105247959 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000392557.8 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_235018.1 | |tss_id=hg_235018.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A024R6P8 |
}} | }} | ||
Revision as of 13:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 105247959 |
|---|---|
| End of the center position in the TSS region: | 105247960 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000392557.8 |
|---|---|
| Distance: | 66 |
| Num_trans: | 4 |
| All_trans: | ENST00000392557.8:66 NM_145685:75 AJ297407:75 AJ297406:-471 |
TATA-Box annotation
| Distance to TSS: | 16377 |
|---|---|
| Nearest PromoterID: | NR_046663 |
| Entrez ID: | 100874096 |
| Nearest Unigene: | Hs.578066 |
| Nearest Refseq: | NR_046663 |
| Nearest Ensembl: | ENSG00000229918 |
| Gene Name: | ZFP36 ring finger protein like 1 |
| Gene Alias: | - |
| Gene Description: | DOCK9 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
