Difference between revisions of "TSS:Hg 57642.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK290034:-52 AB020685:-77 BC041337:-86 BC013169:-103 BC020231:-248 | + | |all_trans=AK290034:-52 AB020685:-77 BC041337:-86 ENST00000379982.8:-89 NM_014899:-89 BC013169:-103 BC020231:-248 ENST00000506817.1:-279 BC047884:-279 ENST00000512878.1:290 CU691986:419 KJ898412:419 AB385392:424 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-52 | |distance=-52 | ||
| − | |distance_to_tss= | + | |distance_to_tss=94 |
|end=95731435 | |end=95731435 | ||
|end_of_center_position=95731430 | |end_of_center_position=95731430 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014899 | |nearest_refseq=NM_014899 | ||
|nearest_unigene=Hs.445030 | |nearest_unigene=Hs.445030 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=95731424 | |start=95731424 | ||
Revision as of 05:50, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 95731429 |
|---|---|
| End of the center position in the TSS region: | 95731430 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK290034 |
|---|---|
| Distance: | -52 |
| Num_trans: | 13 |
| All_trans: | AK290034:-52 AB020685:-77 BC041337:-86 ENST00000379982.8:-89 NM_014899:-89 BC013169:-103 BC020231:-248 ENST00000506817.1:-279 BC047884:-279 ENST00000512878.1:290 CU691986:419 KJ898412:419 AB385392:424 |
TATA-Box annotation
| Distance to TSS: | 94 |
|---|---|
| Nearest PromoterID: | NM_014899 |
| Entrez ID: | 22836 |
| Nearest Unigene: | Hs.445030 |
| Nearest Refseq: | NM_014899 |
| Nearest Ensembl: | ENSG00000164292 |
| Gene Name: | Rho related BTB domain containing 3 |
| Gene Alias: | - |
| Gene Description: | Rho related BTB domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
