Difference between revisions of "TSS:Hg 57644.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000512878 | + | |all_trans=ENST00000512878.1:2 CU691986:131 KJ898412:131 AB385392:136 ENST00000510623.1:233 AK290034:-325 AB020685:-350 BC041337:-359 ENST00000379982.8:-362 NM_014899:-362 BC013169:-376 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss= | + | |distance_to_tss=374 |
|end=95731723 | |end=95731723 | ||
|end_of_center_position=95731711 | |end_of_center_position=95731711 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=95731710 | |start_of_center_position=95731710 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000512878 | + | |transcript_name=ENST00000512878.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_57644.1 | |tss_id=hg_57644.1 | ||
Revision as of 05:50, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 95731710 |
|---|---|
| End of the center position in the TSS region: | 95731711 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000512878.1 |
|---|---|
| Distance: | 2 |
| Num_trans: | 11 |
| All_trans: | ENST00000512878.1:2 CU691986:131 KJ898412:131 AB385392:136 ENST00000510623.1:233 AK290034:-325 AB020685:-350 BC041337:-359 ENST00000379982.8:-362 NM_014899:-362 BC013169:-376 |
TATA-Box annotation
| Distance to TSS: | 374 |
|---|---|
| Nearest PromoterID: | NM_014899 |
| Entrez ID: | 22836 |
| Nearest Unigene: | Hs.445030 |
| Nearest Refseq: | NM_014899 |
| Nearest Ensembl: | ENSG00000164292 |
| Gene Name: | Rho related BTB domain containing 3 |
| Gene Alias: | - |
| Gene Description: | Rho related BTB domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
