Difference between revisions of "TSS:Hg 166006.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=EF608070:170 EF608071:331 |chr=chr17 |cpg_percent=0.015 |distance=170 |distance_to_tss=3435 |end=41621211 |entrez_id=3872 |gc_percent=0.522388 |gene_ali...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CK-17= | ||
| + | |K17= | ||
| + | |PC= | ||
| + | |PC2= | ||
| + | |PCHC1= | ||
|all_trans=EF608070:170 EF608071:331 | |all_trans=EF608070:170 EF608071:331 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=3435 | |distance_to_tss=3435 | ||
|end=41621211 | |end=41621211 | ||
| + | |end_of_center_position=41621196 | ||
|entrez_id=3872 | |entrez_id=3872 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=39.1 | + | |gene_alias=39.1 |
|gene_description=keratin 17 | |gene_description=keratin 17 | ||
|gene_id=3872 | |gene_id=3872 | ||
| Line 24: | Line 30: | ||
|species=human | |species=human | ||
|start=41621179 | |start=41621179 | ||
| + | |start_of_center_position=41621195 | ||
|strand=- | |strand=- | ||
|tata_box="-55(AACCATAAAAAG,-,0.00)" | |tata_box="-55(AACCATAAAAAG,-,0.00)" | ||
Revision as of 02:54, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 41621195 |
|---|---|
| End of the center position in the TSS region: | 41621196 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | EF608070 |
|---|---|
| Distance: | 170 |
| Num_trans: | 2 |
| All_trans: | EF608070:170 EF608071:331 |
TATA-Box annotation
| Distance to TSS: | 3435 |
|---|---|
| Nearest PromoterID: | NM_000422 |
| Entrez ID: | 3872 |
| Nearest Unigene: | Hs.2785 |
| Nearest Refseq: | NM_000422 |
| Nearest Ensembl: | ENSG00000128422 |
| Gene Name: | keratin 17 |
| Gene Alias: | 39.1 |
| Gene Description: | keratin 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-55(AACCATAAAAAG,-,0.00)" |
