Difference between revisions of "TSS:Hg 154463.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000561738.5:-25 uc059vcd.1:-25 |chr=chr16 |cpg_percent=0.035 |distance=-25 |distance_to_tss=3716 |end=58503861 |entrez_id=65009 |gc_percent=0.6218...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SMAP-8= | ||
| + | |SMAP8= | ||
|all_trans=ENST00000561738.5:-25 uc059vcd.1:-25 | |all_trans=ENST00000561738.5:-25 uc059vcd.1:-25 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=3716 | |distance_to_tss=3716 | ||
|end=58503861 | |end=58503861 | ||
| + | |end_of_center_position=58503860 | ||
|entrez_id=65009 | |entrez_id=65009 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=BDM1 | + | |gene_alias=BDM1 |
|gene_description=NDRG family member 4 | |gene_description=NDRG family member 4 | ||
|gene_id=65009 | |gene_id=65009 | ||
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|species=human | |species=human | ||
|start=58503857 | |start=58503857 | ||
| + | |start_of_center_position=58503859 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000561738.5 uc059vcd.1 | |transcript_name=ENST00000561738.5 uc059vcd.1 | ||
Revision as of 19:58, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 58503859 |
|---|---|
| End of the center position in the TSS region: | 58503860 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000561738.5 uc059vcd.1 |
|---|---|
| Distance: | -25 |
| Num_trans: | 2 |
| All_trans: | ENST00000561738.5:-25 uc059vcd.1:-25 |
TATA-Box annotation
| Distance to TSS: | 3716 |
|---|---|
| Nearest PromoterID: | NM_001242836 |
| Entrez ID: | 65009 |
| Nearest Unigene: | Hs.322430 |
| Nearest Refseq: | NM_020465 |
| Nearest Ensembl: | ENSG00000103034 |
| Gene Name: | NDRG family member 4 |
| Gene Alias: | BDM1 |
| Gene Description: | NDRG family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
