Difference between revisions of "TSS:Hg 236286.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |SMAP-8= | ||
| + | |SMAP8= | ||
|all_trans=ENST00000562764.5:75 uc059vau.1:75 NM_020465:89 ENST00000258187.9:109 uc002enk.4:109 ENST00000569404.5:148 uc059vav.1:148 ENST00000569539.5:154 uc059vaw.1:154 ENST00000564126.5:157 uc059vax.1:157 ENST00000562725.5:160 uc059vay.1:160 ENST00000565304.5:167 uc059vaz.1:167 ENST00000567667.5:169 uc059vba.1:169 ENST00000564207.5:-186 uc059vat.1:-186 AB021172:189 ENST00000394282.8:468 uc002enm.4:468 | |all_trans=ENST00000562764.5:75 uc059vau.1:75 NM_020465:89 ENST00000258187.9:109 uc002enk.4:109 ENST00000569404.5:148 uc059vav.1:148 ENST00000569539.5:154 uc059vaw.1:154 ENST00000564126.5:157 uc059vax.1:157 ENST00000562725.5:160 uc059vay.1:160 ENST00000565304.5:167 uc059vaz.1:167 ENST00000567667.5:169 uc059vba.1:169 ENST00000564207.5:-186 uc059vat.1:-186 AB021172:189 ENST00000394282.8:468 uc002enm.4:468 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-89 | |distance_to_tss=-89 | ||
|end=58463556 | |end=58463556 | ||
| + | |end_of_center_position=74890942 | ||
|entrez_id=65009 | |entrez_id=65009 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=BDM1 | + | |gene_alias=BDM1 |
|gene_description=NDRG family member 4 | |gene_description=NDRG family member 4 | ||
|gene_id=65009 | |gene_id=65009 | ||
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|species=human | |species=human | ||
|start=58463555 | |start=58463555 | ||
| + | |start_of_center_position=74890941 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000562764.5 uc059vau.1 | |transcript_name=ENST00000562764.5 uc059vau.1 | ||
Revision as of 21:05, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 74890941 |
|---|---|
| End of the center position in the TSS region: | 74890942 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000562764.5 uc059vau.1 |
|---|---|
| Distance: | 75 |
| Num_trans: | 22 |
| All_trans: | ENST00000562764.5:75 uc059vau.1:75 NM_020465:89 ENST00000258187.9:109 uc002enk.4:109 ENST00000569404.5:148 uc059vav.1:148 ENST00000569539.5:154 uc059vaw.1:154 ENST00000564126.5:157 uc059vax.1:157 ENST00000562725.5:160 uc059vay.1:160 ENST00000565304.5:167 uc059vaz.1:167 ENST00000567667.5:169 uc059vba.1:169 ENST00000564207.5:-186 uc059vat.1:-186 AB021172:189 ENST00000394282.8:468 uc002enm.4:468 |
TATA-Box annotation
| Distance to TSS: | -89 |
|---|---|
| Nearest PromoterID: | NM_020465 |
| Entrez ID: | 65009 |
| Nearest Unigene: | Hs.322430 |
| Nearest Refseq: | NM_020465 |
| Nearest Ensembl: | ENSG00000103034 |
| Gene Name: | NDRG family member 4 |
| Gene Alias: | BDM1 |
| Gene Description: | NDRG family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
