Difference between revisions of "TSS:Hg 236393.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK091316:22 ENST00000562854.1:30 uc059xdr.1:30 ENST00000562371.5:-40 uc059xdo.1:-40 AF370390:-130 ENST00000562539.1:-163 uc059xdq.1:-163 |chr=chr16 |cpg...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FP977= | ||
|all_trans=AK091316:22 ENST00000562854.1:30 uc059xdr.1:30 ENST00000562371.5:-40 uc059xdo.1:-40 AF370390:-130 ENST00000562539.1:-163 uc059xdq.1:-163 | |all_trans=AK091316:22 ENST00000562854.1:30 uc059xdr.1:30 ENST00000562371.5:-40 uc059xdo.1:-40 AF370390:-130 ENST00000562539.1:-163 uc059xdq.1:-163 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=69122 | |distance_to_tss=69122 | ||
|end=74915997 | |end=74915997 | ||
| + | |end_of_center_position=17136241 | ||
|entrez_id=79726 | |entrez_id=79726 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=CDW12 | + | |gene_alias=CDW12 |
|gene_description=WD repeat domain 59 | |gene_description=WD repeat domain 59 | ||
|gene_id=79726 | |gene_id=79726 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Hs.280951 | |nearest_unigene=Hs.280951 | ||
|num_trans=8 | |num_trans=8 | ||
| + | |p90-120= | ||
|species=human | |species=human | ||
|start=74915996 | |start=74915996 | ||
| + | |start_of_center_position=17136240 | ||
|strand=- | |strand=- | ||
|tata_box="1(AGCCCTAAAAGA,-,0.00)" | |tata_box="1(AGCCCTAAAAGA,-,0.00)" | ||
Revision as of 00:27, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17136240 |
|---|---|
| End of the center position in the TSS region: | 17136241 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK091316 |
|---|---|
| Distance: | 22 |
| Num_trans: | 8 |
| All_trans: | AK091316:22 ENST00000562854.1:30 uc059xdr.1:30 ENST00000562371.5:-40 uc059xdo.1:-40 AF370390:-130 ENST00000562539.1:-163 uc059xdq.1:-163 |
TATA-Box annotation
| Distance to TSS: | 69122 |
|---|---|
| Nearest PromoterID: | NM_030581 |
| Entrez ID: | 79726 |
| Nearest Unigene: | Hs.280951 |
| Nearest Refseq: | NM_030581 |
| Nearest Ensembl: | ENSG00000103091 |
| Gene Name: | WD repeat domain 59 |
| Gene Alias: | CDW12 |
| Gene Description: | WD repeat domain 59 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "1(AGCCCTAAAAGA,-,0.00)" |
