Difference between revisions of "TSS:Hg 236500.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 NM_201274:10 NM_015134:10 uc060bus.1:10 uc060but.1:10 uc002gqv.2:10 KF724384:10 BC136479:...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |MRIP= | ||
+ | |RHOIP3= | ||
+ | |RIP3= | ||
|all_trans=ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 NM_201274:10 NM_015134:10 uc060bus.1:10 uc060but.1:10 uc002gqv.2:10 KF724384:10 BC136479:19 AB098507:43 AB384537:97 ENST00000341712.8:99 uc002gqu.3:99 AY296247:99 AB189741:99 ENST00000577514.5:-205 uc060bur.1:-205 | |all_trans=ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 NM_201274:10 NM_015134:10 uc060bus.1:10 uc060but.1:10 uc002gqv.2:10 KF724384:10 BC136479:19 AB098507:43 AB384537:97 ENST00000341712.8:99 uc002gqu.3:99 AY296247:99 AB189741:99 ENST00000577514.5:-205 uc060bur.1:-205 | ||
|chr=chr17 | |chr=chr17 | ||
Line 6: | Line 9: | ||
|distance_to_tss=-10 | |distance_to_tss=-10 | ||
|end=17042750 | |end=17042750 | ||
+ | |end_of_center_position=30235818 | ||
|entrez_id=23164 | |entrez_id=23164 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
− | |gene_alias=M-RIP | + | |gene_alias=M-RIP |
|gene_description=myosin phosphatase Rho interacting protein | |gene_description=myosin phosphatase Rho interacting protein | ||
|gene_id=23164 | |gene_id=23164 | ||
Line 22: | Line 26: | ||
|nearest_unigene=Hs.462341 | |nearest_unigene=Hs.462341 | ||
|num_trans=18 | |num_trans=18 | ||
+ | |p116Rip= | ||
|species=human | |species=human | ||
|start=17042749 | |start=17042749 | ||
+ | |start_of_center_position=30235817 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 NM_201274 NM_015134 uc060bus.1 uc060but.1 uc002gqv.2 KF724384 | |transcript_name=ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 NM_201274 NM_015134 uc060bus.1 uc060but.1 uc002gqv.2 KF724384 |
Revision as of 01:21, 15 May 2019
Basic information about the TSS
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Start of the center position in the TSS region: | 30235817 |
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End of the center position in the TSS region: | 30235818 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 NM_201274 NM_015134 uc060bus.1 uc060but.1 uc002gqv.2 KF724384 |
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Distance: | 10 |
Num_trans: | 18 |
All_trans: | ENST00000395806.5:10 ENST00000395807.2:10 ENST00000395811.9:10 NM_201274:10 NM_015134:10 uc060bus.1:10 uc060but.1:10 uc002gqv.2:10 KF724384:10 BC136479:19 AB098507:43 AB384537:97 ENST00000341712.8:99 uc002gqu.3:99 AY296247:99 AB189741:99 ENST00000577514.5:-205 uc060bur.1:-205 |
TATA-Box annotation
Distance to TSS: | -10 |
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Nearest PromoterID: | NM_201274 |
Entrez ID: | 23164 |
Nearest Unigene: | Hs.462341 |
Nearest Refseq: | NM_015134 |
Nearest Ensembl: | ENSG00000133030 |
Gene Name: | myosin phosphatase Rho interacting protein |
Gene Alias: | M-RIP |
Gene Description: | myosin phosphatase Rho interacting protein |
Gene Type: | protein-coding |
CpG%: | 0.2 |
GC%: | 0.850746 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |