Difference between revisions of "TSS:Mm 10561.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK011601:-250 AK171729:-391 |chr=chr2 |cpg_percent=0.065 |distance=-250 |distance_to_tss=717 |end=18027983 |entrez_id=100034739 |gc_percent=0.661692 |ge...") |
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|distance_to_tss=717 | |distance_to_tss=717 | ||
|end=18027983 | |end=18027983 | ||
| + | |end_of_center_position=18027966 | ||
|entrez_id=100034739 | |entrez_id=100034739 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=18027948 | |start=18027948 | ||
| + | |start_of_center_position=18027965 | ||
|strand=+ | |strand=+ | ||
|tata_box="-7(GCCTTTAGAGTC,+,0.00)" | |tata_box="-7(GCCTTTAGAGTC,+,0.00)" | ||
Revision as of 01:24, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 18027965 |
|---|---|
| End of the center position in the TSS region: | 18027966 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK011601 |
|---|---|
| Distance: | -250 |
| Num_trans: | 2 |
| All_trans: | AK011601:-250 AK171729:-391 |
TATA-Box annotation
| Distance to TSS: | 717 |
|---|---|
| Nearest PromoterID: | NR_028378 |
| Entrez ID: | 100034739 |
| Nearest Unigene: | Mm.401643 |
| Nearest Refseq: | NR_028378 |
| Nearest Ensembl: | |
| Gene Name: | "predicted gene, 17762" |
| Gene Alias: | - |
| Gene Description: | "predicted gene, 17762" |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(GCCTTTAGAGTC,+,0.00)" |
