Difference between revisions of "TSS:Hg 166011.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000493253.5:0 uc060fce.1:0 BX647923:0 CU687210:-7 EF608068:70 ENST00000577817.3:-167 uc060fcg.1:-167 AB528302:-214 DQ891101:-217 DQ894283:-217 ENS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CK-17= | ||
| + | |K17= | ||
| + | |PC= | ||
| + | |PC2= | ||
| + | |PCHC1= | ||
|all_trans=ENST00000493253.5:0 uc060fce.1:0 BX647923:0 CU687210:-7 EF608068:70 ENST00000577817.3:-167 uc060fcg.1:-167 AB528302:-214 DQ891101:-217 DQ894283:-217 ENST00000540235.5:-244 uc060fcd.1:-244 BC072018:-244 BC072019:-258 BC011901:-260 X62571:-260 BC000159:-262 BC056421:-262 ENST00000491673.1:-278 uc060fci.1:-278 AK304373:-278 ENST00000311208.12:-280 uc002hxh.3:-280 AK095342:-280 NM_000422:-333 | |all_trans=ENST00000493253.5:0 uc060fce.1:0 BX647923:0 CU687210:-7 EF608068:70 ENST00000577817.3:-167 uc060fcg.1:-167 AB528302:-214 DQ891101:-217 DQ894283:-217 ENST00000540235.5:-244 uc060fcd.1:-244 BC072018:-244 BC072019:-258 BC011901:-260 X62571:-260 BC000159:-262 BC056421:-262 ENST00000491673.1:-278 uc060fci.1:-278 AK304373:-278 ENST00000311208.12:-280 uc002hxh.3:-280 AK095342:-280 NM_000422:-333 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=342 | |distance_to_tss=342 | ||
|end=41624297 | |end=41624297 | ||
| + | |end_of_center_position=41624288 | ||
|entrez_id=3872 | |entrez_id=3872 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=39.1 | + | |gene_alias=39.1 |
|gene_description=keratin 17 | |gene_description=keratin 17 | ||
|gene_id=3872 | |gene_id=3872 | ||
| Line 24: | Line 30: | ||
|species=human | |species=human | ||
|start=41624278 | |start=41624278 | ||
| + | |start_of_center_position=41624287 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000493253.5 uc060fce.1 BX647923 | |transcript_name=ENST00000493253.5 uc060fce.1 BX647923 | ||
Revision as of 02:55, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 41624287 |
|---|---|
| End of the center position in the TSS region: | 41624288 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000493253.5 uc060fce.1 BX647923 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000493253.5:0 uc060fce.1:0 BX647923:0 CU687210:-7 EF608068:70 ENST00000577817.3:-167 uc060fcg.1:-167 AB528302:-214 DQ891101:-217 DQ894283:-217 ENST00000540235.5:-244 uc060fcd.1:-244 BC072018:-244 BC072019:-258 BC011901:-260 X62571:-260 BC000159:-262 BC056421:-262 ENST00000491673.1:-278 uc060fci.1:-278 AK304373:-278 ENST00000311208.12:-280 uc002hxh.3:-280 AK095342:-280 NM_000422:-333 |
TATA-Box annotation
| Distance to TSS: | 342 |
|---|---|
| Nearest PromoterID: | NM_000422 |
| Entrez ID: | 3872 |
| Nearest Unigene: | Hs.2785 |
| Nearest Refseq: | NM_000422 |
| Nearest Ensembl: | ENSG00000128422 |
| Gene Name: | keratin 17 |
| Gene Alias: | 39.1 |
| Gene Description: | keratin 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
