Difference between revisions of "TSS:Hg 166015.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000463128.5:-21 uc060fcf.1:-21 NM_000422:173 ENST00000311208.12:226 uc002hxh.3:226 AK095342:226 ENST00000491673.1:228 uc060fci.1:228 AK304373:228...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CK-17= | ||
| + | |K17= | ||
| + | |PC= | ||
| + | |PC2= | ||
| + | |PCHC1= | ||
|all_trans=ENST00000463128.5:-21 uc060fcf.1:-21 NM_000422:173 ENST00000311208.12:226 uc002hxh.3:226 AK095342:226 ENST00000491673.1:228 uc060fci.1:228 AK304373:228 BC000159:244 BC056421:244 BC011901:246 X62571:246 BC072019:248 ENST00000540235.5:262 uc060fcd.1:262 BC072018:262 DQ891101:289 DQ894283:289 AB528302:292 ENST00000577817.3:339 uc060fcg.1:339 CU687210:499 | |all_trans=ENST00000463128.5:-21 uc060fcf.1:-21 NM_000422:173 ENST00000311208.12:226 uc002hxh.3:226 AK095342:226 ENST00000491673.1:228 uc060fci.1:228 AK304373:228 BC000159:244 BC056421:244 BC011901:246 X62571:246 BC072019:248 ENST00000540235.5:262 uc060fcd.1:262 BC072018:262 DQ891101:289 DQ894283:289 AB528302:292 ENST00000577817.3:339 uc060fcg.1:339 CU687210:499 | ||
|chr=chr17 | |chr=chr17 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=-182 | |distance_to_tss=-182 | ||
|end=41624821 | |end=41624821 | ||
| + | |end_of_center_position=41624812 | ||
|entrez_id=3872 | |entrez_id=3872 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=39.1 | + | |gene_alias=39.1 |
|gene_description=keratin 17 | |gene_description=keratin 17 | ||
|gene_id=3872 | |gene_id=3872 | ||
| Line 24: | Line 30: | ||
|species=human | |species=human | ||
|start=41624802 | |start=41624802 | ||
| + | |start_of_center_position=41624811 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000463128.5 uc060fcf.1 | |transcript_name=ENST00000463128.5 uc060fcf.1 | ||
Revision as of 02:55, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 41624811 |
|---|---|
| End of the center position in the TSS region: | 41624812 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000463128.5 uc060fcf.1 |
|---|---|
| Distance: | -21 |
| Num_trans: | 23 |
| All_trans: | ENST00000463128.5:-21 uc060fcf.1:-21 NM_000422:173 ENST00000311208.12:226 uc002hxh.3:226 AK095342:226 ENST00000491673.1:228 uc060fci.1:228 AK304373:228 BC000159:244 BC056421:244 BC011901:246 X62571:246 BC072019:248 ENST00000540235.5:262 uc060fcd.1:262 BC072018:262 DQ891101:289 DQ894283:289 AB528302:292 ENST00000577817.3:339 uc060fcg.1:339 CU687210:499 |
TATA-Box annotation
| Distance to TSS: | -182 |
|---|---|
| Nearest PromoterID: | NM_000422 |
| Entrez ID: | 3872 |
| Nearest Unigene: | Hs.2785 |
| Nearest Refseq: | NM_000422 |
| Nearest Ensembl: | ENSG00000128422 |
| Gene Name: | keratin 17 |
| Gene Alias: | 39.1 |
| Gene Description: | keratin 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
