Difference between revisions of "TSS:Hg 242191.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr6 |cpg_percent=0.03 |distance= |distance_to_tss=114936 |end=35004199 |entrez_id=23294 |gc_percent=0.542289 |gene_alias=ANKS1 |gene_description=ankyrin repe...") |
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| Line 5: | Line 5: | ||
|distance_to_tss=114936 | |distance_to_tss=114936 | ||
|end=35004199 | |end=35004199 | ||
| + | |end_of_center_position=13989872 | ||
|entrez_id=23294 | |entrez_id=23294 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=35004195 | |start=35004195 | ||
| + | |start_of_center_position=13989871 | ||
|strand=+ | |strand=+ | ||
|tata_box="-30(GCCCTTAAAAGG,-,0.00),-29(CCCTTAAAAGGG,+,0.00),-28(CCTTAAAAGGGA,+,0.00)" | |tata_box="-30(GCCCTTAAAAGG,-,0.00),-29(CCCTTAAAAGGG,+,0.00),-28(CCTTAAAAGGGA,+,0.00)" | ||
Revision as of 03:02, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 13989871 |
|---|---|
| End of the center position in the TSS region: | 13989872 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 114936 |
|---|---|
| Nearest PromoterID: | NM_015245 |
| Entrez ID: | 23294 |
| Nearest Unigene: | Hs.656492 |
| Nearest Refseq: | NM_015245 |
| Nearest Ensembl: | ENSG00000064999 |
| Gene Name: | ANKS1A |
| Gene Alias: | ANKS1 |
| Gene Description: | ankyrin repeat and sterile alpha motif domain containing 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-30(GCCCTTAAAAGG,-,0.00),-29(CCCTTAAAAGGG,+,0.00),-28(CCTTAAAAGGGA,+,0.00)" |
