Difference between revisions of "TSS:Hg 171509.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK302831:-11 ENST00000399380.7:-21 NM_001308176:-21 uc010xbn.2:-21 |chr=chr18 |cpg_percent=0.015 |distance=-11 |distance_to_tss=25 |end=28036564 |entrez...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDHN= | ||
| + | |CDw325= | ||
| + | |NCAD= | ||
|all_trans=AK302831:-11 ENST00000399380.7:-21 NM_001308176:-21 uc010xbn.2:-21 | |all_trans=AK302831:-11 ENST00000399380.7:-21 NM_001308176:-21 uc010xbn.2:-21 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=25 | |distance_to_tss=25 | ||
|end=28036564 | |end=28036564 | ||
| + | |end_of_center_position=28036560 | ||
|entrez_id=1000 | |entrez_id=1000 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| − | |gene_alias=CD325 | + | |gene_alias=CD325 |
|gene_description=cadherin 2 | |gene_description=cadherin 2 | ||
|gene_id=1000 | |gene_id=1000 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=28036555 | |start=28036555 | ||
| + | |start_of_center_position=28036559 | ||
|strand=- | |strand=- | ||
|transcript_name=AK302831 | |transcript_name=AK302831 | ||
Revision as of 10:03, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 28036559 |
|---|---|
| End of the center position in the TSS region: | 28036560 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK302831 |
|---|---|
| Distance: | -11 |
| Num_trans: | 4 |
| All_trans: | AK302831:-11 ENST00000399380.7:-21 NM_001308176:-21 uc010xbn.2:-21 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_001308176 |
| Entrez ID: | 1000 |
| Nearest Unigene: | Hs.464829 |
| Nearest Refseq: | NM_001792 |
| Nearest Ensembl: | ENSG00000170558 |
| Gene Name: | cadherin 2 |
| Gene Alias: | CD325 |
| Gene Description: | cadherin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
