Difference between revisions of "TSS:Mm 16512.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC004646:16 BC027218:16 AK052236:26 ENSMUST00000131284.7:-38 AK173276:-38 BC021513:-54 AK049764:-65 ENSMUST00000116366.8:-67 NM_001048148:-67 uc008omc.1...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |BC021513= | ||
|all_trans=BC004646:16 BC027218:16 AK052236:26 ENSMUST00000131284.7:-38 AK173276:-38 BC021513:-54 AK049764:-65 ENSMUST00000116366.8:-67 NM_001048148:-67 uc008omc.1:-67 BC034599:-67 ENSMUST00000108807.8:-85 AK159801:-85 | |all_trans=BC004646:16 BC027218:16 AK052236:26 ENSMUST00000131284.7:-38 AK173276:-38 BC021513:-54 AK049764:-65 ENSMUST00000116366.8:-67 NM_001048148:-67 uc008omc.1:-67 BC034599:-67 ENSMUST00000108807.8:-85 AK159801:-85 | ||
|chr=chr2 | |chr=chr2 | ||
Line 6: | Line 7: | ||
|distance_to_tss=72 | |distance_to_tss=72 | ||
|end=181365500 | |end=181365500 | ||
+ | |end_of_center_position=181365495 | ||
|entrez_id=229007 | |entrez_id=229007 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
− | |gene_alias=1500006I01Rik | + | |gene_alias=1500006I01Rik |
|gene_description="zinc finger, CCCH-type with G patch domain" | |gene_description="zinc finger, CCCH-type with G patch domain" | ||
|gene_id=229007 | |gene_id=229007 | ||
Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=181365489 | |start=181365489 | ||
+ | |start_of_center_position=181365494 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC004646 BC027218 | |transcript_name=BC004646 BC027218 |
Revision as of 12:29, 15 May 2019
Basic information about the TSS
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Start of the center position in the TSS region: | 181365494 |
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End of the center position in the TSS region: | 181365495 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC004646 BC027218 |
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Distance: | 16 |
Num_trans: | 13 |
All_trans: | BC004646:16 BC027218:16 AK052236:26 ENSMUST00000131284.7:-38 AK173276:-38 BC021513:-54 AK049764:-65 ENSMUST00000116366.8:-67 NM_001048148:-67 uc008omc.1:-67 BC034599:-67 ENSMUST00000108807.8:-85 AK159801:-85 |
TATA-Box annotation
Distance to TSS: | 72 |
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Nearest PromoterID: | NM_001048148 |
Entrez ID: | 229007 |
Nearest Unigene: | Mm.87720 |
Nearest Refseq: | NM_144894 |
Nearest Ensembl: | ENSMUSG00000027582 |
Gene Name: | "zinc finger, CCCH-type with G patch domain" |
Gene Alias: | 1500006I01Rik |
Gene Description: | "zinc finger, CCCH-type with G patch domain" |
Gene Type: | protein-coding |
CpG%: | 0.12 |
GC%: | 0.741294 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |