Difference between revisions of "TSS:Mm 165567.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_029289:-16 uc012cnq.1:-16 AK005586:-16 ENSMUST00000029080.4:-50 AM040460:192 |chr=chr3 |cpg_percent=0.03 |distance=-16 |distance_to_tss=20 |end=17948...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AV209098= | ||
|all_trans=NM_029289:-16 uc012cnq.1:-16 AK005586:-16 ENSMUST00000029080.4:-50 AM040460:192 | |all_trans=NM_029289:-16 uc012cnq.1:-16 AK005586:-16 ENSMUST00000029080.4:-50 AM040460:192 | ||
|chr=chr3 | |chr=chr3 | ||
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|distance_to_tss=20 | |distance_to_tss=20 | ||
|end=17948468 | |end=17948468 | ||
| + | |end_of_center_position=17948464 | ||
|entrez_id=75439 | |entrez_id=75439 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=1700001F04Rik | + | |gene_alias=1700001F04Rik |
|gene_description=cysteine-rich perinuclear theca 12 | |gene_description=cysteine-rich perinuclear theca 12 | ||
|gene_id=75439 | |gene_id=75439 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=17948459 | |start=17948459 | ||
| + | |start_of_center_position=17948463 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_029289 uc012cnq.1 AK005586 | |transcript_name=NM_029289 uc012cnq.1 AK005586 | ||
Revision as of 12:58, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17948463 |
|---|---|
| End of the center position in the TSS region: | 17948464 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_029289 uc012cnq.1 AK005586 |
|---|---|
| Distance: | -16 |
| Num_trans: | 5 |
| All_trans: | NM_029289:-16 uc012cnq.1:-16 AK005586:-16 ENSMUST00000029080.4:-50 AM040460:192 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_029289 |
| Entrez ID: | 75439 |
| Nearest Unigene: | Mm.27023 |
| Nearest Refseq: | NM_029289 |
| Nearest Ensembl: | ENSMUSG00000027564 |
| Gene Name: | cysteine-rich perinuclear theca 12 |
| Gene Alias: | 1700001F04Rik |
| Gene Description: | cysteine-rich perinuclear theca 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
