Difference between revisions of "TSS:Hg 100212.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000359039. | + | |all_trans=ENST00000359039.5:0 NM_018847:0 AY172949:0 AB037775:0 AL713669:0 BC039133:0 AK091715:0 BC064958:5 BX538121:117 BC113513:462 BC105008:462 KJ899219:498 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=19 |
|end=21335412 | |end=21335412 | ||
|end_of_center_position=21335385 | |end_of_center_position=21335385 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018847 | |nearest_refseq=NM_018847 | ||
|nearest_unigene=Hs.701778 | |nearest_unigene=Hs.701778 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=21335357 | |start=21335357 | ||
|start_of_center_position=21335384 | |start_of_center_position=21335384 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000359039. | + | |transcript_name=ENST00000359039.5 NM_018847 AY172949 AB037775 AL713669 BC039133 AK091715 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100212.1 | |tss_id=hg_100212.1 | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21335384 |
|---|---|
| End of the center position in the TSS region: | 21335385 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000359039.5 NM_018847 AY172949 AB037775 AL713669 BC039133 AK091715 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000359039.5:0 NM_018847:0 AY172949:0 AB037775:0 AL713669:0 BC039133:0 AK091715:0 BC064958:5 BX538121:117 BC113513:462 BC105008:462 KJ899219:498 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_018847 |
| Entrez ID: | 55958 |
| Nearest Unigene: | Hs.701778 |
| Nearest Refseq: | NM_018847 |
| Nearest Ensembl: | ENSG00000198642 |
| Gene Name: | kelch like family member 9 |
| Gene Alias: | - |
| Gene Description: | kelch like family member 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
