Difference between revisions of "TSS:Hg 100547.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK302320:0 AK301951:0 ENST00000378788.4:-15 NM_001141917:-15 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=21 |
|end=34729473 | |end=34729473 | ||
|end_of_center_position=34729467 | |end_of_center_position=34729467 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001141917 | |nearest_refseq=NM_001141917 | ||
|nearest_unigene=Hs.522093 | |nearest_unigene=Hs.522093 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=34729460 | |start=34729460 | ||
|start_of_center_position=34729466 | |start_of_center_position=34729466 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK302320 AK301951 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100547.1 | |tss_id=hg_100547.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DY95 | + | |uniprot_id=B4DY95 |
}} | }} | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34729466 |
|---|---|
| End of the center position in the TSS region: | 34729467 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK302320 AK301951 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | AK302320:0 AK301951:0 ENST00000378788.4:-15 NM_001141917:-15 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_001141917 |
| Entrez ID: | 259308 |
| Nearest Unigene: | Hs.522093 |
| Nearest Refseq: | NM_001141917 |
| Nearest Ensembl: | ENSG00000205108 |
| Gene Name: | family with sequence similarity 205 member A |
| Gene Alias: | C9orf144B |
| Gene Description: | family with sequence similarity 205 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
