Difference between revisions of "TSS:Hg 100548.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000378788.4:0 NM_001141917:0 AK302320:15 AK301951:16 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=34729495 | |end=34729495 | ||
|end_of_center_position=34729489 | |end_of_center_position=34729489 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001141917 | |nearest_refseq=NM_001141917 | ||
|nearest_unigene=Hs.522093 | |nearest_unigene=Hs.522093 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=34729482 | |start=34729482 | ||
|start_of_center_position=34729488 | |start_of_center_position=34729488 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000378788.4 NM_001141917 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100548.1 | |tss_id=hg_100548.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q6ZU69 |
}} | }} | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34729488 |
|---|---|
| End of the center position in the TSS region: | 34729489 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378788.4 NM_001141917 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000378788.4:0 NM_001141917:0 AK302320:15 AK301951:16 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001141917 |
| Entrez ID: | 259308 |
| Nearest Unigene: | Hs.522093 |
| Nearest Refseq: | NM_001141917 |
| Nearest Ensembl: | ENSG00000205108 |
| Gene Name: | family with sequence similarity 205 member A |
| Gene Alias: | C9orf144B |
| Gene Description: | family with sequence similarity 205 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
