Difference between revisions of "TSS:Hg 100692.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000377877.4 | + | |all_trans=ENST00000377877.4:-72 AK093480:-74 AF394047:-78 AK097653:118 ENST00000357058.7:-123 ENST00000350199.8:-123 NM_194332:-123 NM_194328:-123 ENST00000491349.5:-396 ENST00000377885.6:-398 ENST00000484621.1:-398 NM_194330:-398 ENST00000353739.8:441 ENST00000611646.4:441 BC033786:441 ENST00000259605.11:471 NM_022781:471 NM_194329:471 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_022781 | |nearest_refseq=NM_022781 | ||
|nearest_unigene=Hs.333503 | |nearest_unigene=Hs.333503 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=36400739 | |start=36400739 | ||
|start_of_center_position=36400769 | |start_of_center_position=36400769 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000377877.4 | + | |transcript_name=ENST00000377877.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100692.1 | |tss_id=hg_100692.1 | ||
Revision as of 15:25, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 36400769 |
|---|---|
| End of the center position in the TSS region: | 36400770 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377877.4 |
|---|---|
| Distance: | -72 |
| Num_trans: | 18 |
| All_trans: | ENST00000377877.4:-72 AK093480:-74 AF394047:-78 AK097653:118 ENST00000357058.7:-123 ENST00000350199.8:-123 NM_194332:-123 NM_194328:-123 ENST00000491349.5:-396 ENST00000377885.6:-398 ENST00000484621.1:-398 NM_194330:-398 ENST00000353739.8:441 ENST00000611646.4:441 BC033786:441 ENST00000259605.11:471 NM_022781:471 NM_194329:471 |
TATA-Box annotation
| Distance to TSS: | 153 |
|---|---|
| Nearest PromoterID: | NM_194332 |
| Entrez ID: | 152006 |
| Nearest Unigene: | Hs.333503 |
| Nearest Refseq: | NM_022781 |
| Nearest Ensembl: | ENSG00000137075 |
| Gene Name: | ring finger protein 38 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
