Difference between revisions of "TSS:Hg 100696.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000377885.6:0 ENST00000491349.5:0 ENST00000484621.1:0 NM_194330 | + | |all_trans=ENST00000377885.6:0 ENST00000491349.5:0 ENST00000484621.1:0 NM_194330:0 ENST00000357058.7:236 ENST00000350199.8:236 NM_194332:236 NM_194328:236 AF394047:281 AK093480:285 ENST00000377877.4:287 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_022781 | |nearest_refseq=NM_022781 | ||
|nearest_unigene=Hs.333503 | |nearest_unigene=Hs.333503 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=36401158 | |start=36401158 | ||
|start_of_center_position=36401190 | |start_of_center_position=36401190 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000377885.6 ENST00000491349.5 ENST00000484621.1 NM_194330 | + | |transcript_name=ENST00000377885.6 ENST00000491349.5 ENST00000484621.1 NM_194330 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100696.1 | |tss_id=hg_100696.1 | ||
Revision as of 15:26, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 36401190 |
|---|---|
| End of the center position in the TSS region: | 36401191 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377885.6 ENST00000491349.5 ENST00000484621.1 NM_194330 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000377885.6:0 ENST00000491349.5:0 ENST00000484621.1:0 NM_194330:0 ENST00000357058.7:236 ENST00000350199.8:236 NM_194332:236 NM_194328:236 AF394047:281 AK093480:285 ENST00000377877.4:287 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_194330 |
| Entrez ID: | 152006 |
| Nearest Unigene: | Hs.333503 |
| Nearest Refseq: | NM_022781 |
| Nearest Ensembl: | ENSG00000137075 |
| Gene Name: | ring finger protein 38 |
| Gene Alias: | - |
| Gene Description: | ring finger protein 38 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
