Difference between revisions of "TSS:Hg 100793.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC011779:-1 BC065527:44 | + | |all_trans=ENST00000665642.1:0 BC011779:-1 BC065527:44 ENST00000365604.1:245 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=1233 | |distance_to_tss=1233 | ||
|end=62802713 | |end=62802713 | ||
| Line 17: | Line 17: | ||
|nearest_refseq=NR_121647 | |nearest_refseq=NR_121647 | ||
|nearest_unigene=Hs.351215 | |nearest_unigene=Hs.351215 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=62802682 | |start=62802682 | ||
|start_of_center_position=62802697 | |start_of_center_position=62802697 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000665642.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100793.1 | |tss_id=hg_100793.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:28, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 62802697 |
|---|---|
| End of the center position in the TSS region: | 62802698 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000665642.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000665642.1:0 BC011779:-1 BC065527:44 ENST00000365604.1:245 |
TATA-Box annotation
| Distance to TSS: | 1233 |
|---|---|
| Nearest PromoterID: | NR_121647 |
| Entrez ID: | 103352539 |
| Nearest Unigene: | Hs.351215 |
| Nearest Refseq: | NR_121647 |
| Nearest Ensembl: | ENSG00000238113 |
| Gene Name: | LINC01410 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1410 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
