Difference between revisions of "TSS:Hg 100852.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BTEB1= | |BTEB1= | ||
| − | |all_trans=BC069431:434 AK313631:434 BC074879:459 BC074880:459 | + | |all_trans=LF345227:100 MA580804:100 LF345226:-126 MA580803:-126 LF345228:422 MA580805:422 BC069431:434 AK313631:434 BC074879:459 BC074880:459 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=100 |
|distance_to_tss=781 | |distance_to_tss=781 | ||
|end=70413881 | |end=70413881 | ||
| Line 10: | Line 10: | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=BTEB | + | |gene_alias=BTEB|BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
|gene_id=687 | |gene_id=687 | ||
| − | |gene_name= | + | |gene_name=KLF9 |
|gene_source=HGNC:1123 | |gene_source=HGNC:1123 | ||
|gene_symbol=KLF9 | |gene_symbol=KLF9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=70413870 | |start=70413870 | ||
|start_of_center_position=70413875 | |start_of_center_position=70413875 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF345227 MA580804 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100852.1 | |tss_id=hg_100852.1 | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70413875 |
|---|---|
| End of the center position in the TSS region: | 70413876 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF345227 MA580804 |
|---|---|
| Distance: | 100 |
| Num_trans: | 10 |
| All_trans: | LF345227:100 MA580804:100 LF345226:-126 MA580803:-126 LF345228:422 MA580805:422 BC069431:434 AK313631:434 BC074879:459 BC074880:459 |
TATA-Box annotation
| Distance to TSS: | 781 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | KLF9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
