Difference between revisions of "TSS:Hg 100915.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF345216:-11 MA580793:-11 LF345215:-447 MA580792:-447 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-11 |
| − | |distance_to_tss= | + | |distance_to_tss=84896 |
|end=71683620 | |end=71683620 | ||
|end_of_center_position=71683618 | |end_of_center_position=71683618 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| − | |gene_alias= | + | |gene_alias=TMEM2 |
| − | |gene_description= | + | |gene_description=cell migration inducing hyaluronidase 2 |
| − | |gene_name= | + | |gene_name=CEMIP2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=71683614 | |start=71683614 | ||
|start_of_center_position=71683617 | |start_of_center_position=71683617 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF345216 MA580793 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100915.1 | |tss_id=hg_100915.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71683617 |
|---|---|
| End of the center position in the TSS region: | 71683618 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345216 MA580793 |
|---|---|
| Distance: | -11 |
| Num_trans: | 4 |
| All_trans: | LF345216:-11 MA580793:-11 LF345215:-447 MA580792:-447 |
TATA-Box annotation
| Distance to TSS: | 84896 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | CEMIP2 |
| Gene Alias: | TMEM2 |
| Gene Description: | cell migration inducing hyaluronidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
