Difference between revisions of "TSS:Hg 100945.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-329 | |distance_to_tss=-329 | ||
|end=72305117 | |end=72305117 | ||
| Line 13: | Line 13: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000225434 | |nearest_ensembl=ENSG00000225434 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_110953 |
|nearest_refseq=NR_110952 | |nearest_refseq=NR_110952 | ||
|nearest_unigene=Hs.54957 | |nearest_unigene=Hs.54957 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=72305107 | |start_of_center_position=72305107 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-54(CCTTATCTACCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72305107 |
|---|---|
| End of the center position in the TSS region: | 72305108 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -329 |
|---|---|
| Nearest PromoterID: | NR_110953 |
| Entrez ID: | 100507540 |
| Nearest Unigene: | Hs.54957 |
| Nearest Refseq: | NR_110952 |
| Nearest Ensembl: | ENSG00000225434 |
| Gene Name: | LINC01504 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1504 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -54(CCTTATCTACCC,+,0.00) |
