Difference between revisions of "TSS:Hg 101024.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK000972:0 AK225349:0 BC039588:8 ENST00000376854.6:-11 NM_017998:-11 KJ894122:216 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=48 |
|end=74952901 | |end=74952901 | ||
|end_of_center_position=74952865 | |end_of_center_position=74952865 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_017998 | |nearest_refseq=NM_017998 | ||
|nearest_unigene=Hs.532296 | |nearest_unigene=Hs.532296 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=74952827 | |start=74952827 | ||
|start_of_center_position=74952864 | |start_of_center_position=74952864 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK000972 AK225349 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101024.1 | |tss_id=hg_101024.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 15:33, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 74952864 |
|---|---|
| End of the center position in the TSS region: | 74952865 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK000972 AK225349 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AK000972:0 AK225349:0 BC039588:8 ENST00000376854.6:-11 NM_017998:-11 KJ894122:216 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_017998 |
| Entrez ID: | 55071 |
| Nearest Unigene: | Hs.532296 |
| Nearest Refseq: | NM_017998 |
| Nearest Ensembl: | ENSG00000135045 |
| Gene Name: | chromosome 9 open reading frame 40 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 40 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
