Difference between revisions of "TSS:Hg 101077.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC027886:-18 AK312460:-27 ENST00000341700.7:-33 NM_004297:-33 AF105201:348 DQ890949:482 DQ890954:482 EU176237:482 DQ894116:482 KJ905380:485 AF493903:486 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-18 | |distance=-18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=38 |
|end=77648289 | |end=77648289 | ||
|end_of_center_position=77648284 | |end_of_center_position=77648284 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004297 | |nearest_refseq=NM_004297 | ||
|nearest_unigene=Hs.657795 | |nearest_unigene=Hs.657795 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=77648278 | |start=77648278 | ||
|start_of_center_position=77648283 | |start_of_center_position=77648283 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-72(CCACTTAGAGCC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=BC027886 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101077.1 | |tss_id=hg_101077.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 15:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 77648283 |
|---|---|
| End of the center position in the TSS region: | 77648284 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC027886 |
|---|---|
| Distance: | -18 |
| Num_trans: | 11 |
| All_trans: | BC027886:-18 AK312460:-27 ENST00000341700.7:-33 NM_004297:-33 AF105201:348 DQ890949:482 DQ890954:482 EU176237:482 DQ894116:482 KJ905380:485 AF493903:486 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_004297 |
| Entrez ID: | 9630 |
| Nearest Unigene: | Hs.657795 |
| Nearest Refseq: | NM_004297 |
| Nearest Ensembl: | ENSG00000156049 |
| Gene Name: | G protein subunit alpha 14 |
| Gene Alias: | - |
| Gene Description: | G protein subunit alpha 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -72(CCACTTAGAGCC,+,0.00) |
