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Difference between revisions of "TSS:Hg 100418.1"

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Line 11: Line 11:
 
|fSAP57=
 
|fSAP57=
 
|gc_percent=0.636816
 
|gc_percent=0.636816
|gene_alias=BWD|SMU-1|fSAP57
+
|gene_alias=BWD{{!}}SMU-1{{!}}fSAP57
 
|gene_description=SMU1 DNA replication regulator and spliceosomal factor
 
|gene_description=SMU1 DNA replication regulator and spliceosomal factor
 
|gene_id=55234
 
|gene_id=55234

Latest revision as of 16:17, 15 June 2021

Basic information about the TSS


TSS ID:hg_100418.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33076725
End:33076736
Strand:-
TSS Score:1
Start of the center position in the TSS region:33076730
End of the center position in the TSS region:33076731



Gene and protein annotation


Transcript_name:LP895622
Distance:6
GeneID:55234
HGNC/MGI_ID:HGNC:18247
UniProt_ID:
Gene_name:SMU1
Gene_symbol:SMU1
Gene_synonyms:BWD FLJ10805 SMU-1 fSAP57
Gene_source:HGNC:18247



Transcript annotation


Transcript_name:LP895622
Distance:6
Num_trans:13
All_trans:LP895622:6 ENST00000397149.4:52 NM_018225:52 AK225559:55 AK304767:59 AK225587:61 BC002876:74 EF011613:74 AK001667:80 KJ894162:116 DQ893005:118 DQ896251:118 CU678268:118



TATA-Box annotation


Distance to TSS:-57
Nearest PromoterID:NM_018225
Entrez ID:55234
Nearest Unigene:Hs.655351
Nearest Refseq:NM_018225
Nearest Ensembl:ENSG00000122692
Gene Name:SMU1
Gene Alias:BWD|SMU-1|fSAP57
Gene Description:SMU1 DNA replication regulator and spliceosomal factor
Gene Type:protein-coding
CpG%:0.08
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):