Difference between revisions of "TSS:Hg 100631.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DA1= | |DA1= | ||
|DA2B= | |DA2B= | ||
| + | |DA2B4= | ||
|HEL-S-273= | |HEL-S-273= | ||
|NEM4= | |NEM4= | ||
| Line 14: | Line 15: | ||
|entrez_id=7169 | |entrez_id=7169 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=AMCD1 | + | |gene_alias=AMCD1{{!}}DA1{{!}}DA2B{{!}}DA2B4{{!}}HEL-S-273{{!}}NEM4{{!}}TMSB |
|gene_description=tropomyosin 2 | |gene_description=tropomyosin 2 | ||
|gene_id=7169 | |gene_id=7169 | ||
Revision as of 16:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35689925 |
|---|---|
| End of the center position in the TSS region: | 35689926 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000645482.3 ENST00000647435.1 ENST00000604975.1 NM_001301226 NM_003289 AK223258 M12125 X06825 AK304803 AK300249 AK294522 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | ENST00000645482.3:0 ENST00000647435.1:0 ENST00000604975.1:0 NM_001301226:0 NM_003289:0 AK223258:0 M12125:0 X06825:0 AK304803:0 AK300249:0 AK294522:0 ENST00000329305.6:6 M74817:13 M75165:13 ENST00000471212.5:19 BC011776:43 DQ892908:100 DQ896159:100 KJ892308:101 KR710416:101 KR710417:101 KR710418:101 KR710419:101 EU106177:102 AK130045:116 ENST00000378292.9:-123 NM_213674:-123 NM_001301227:-123 FJ224304:-123 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001301226 |
| Entrez ID: | 7169 |
| Nearest Unigene: | Hs.300772 |
| Nearest Refseq: | NM_003289 |
| Nearest Ensembl: | ENSG00000198467 |
| Gene Name: | tropomyosin 2 |
| Gene Alias: | AMCD1|DA1|DA2B|DA2B4|HEL-S-273|NEM4|TMSB |
| Gene Description: | tropomyosin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -31(CCTTTTAGGCGC,+,0.00) |
