Difference between revisions of "TSS:Hg 101122.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ESG1= | |ESG1= | ||
|GRG1= | |GRG1= | ||
| − | |all_trans= | + | |all_trans=NM_001303103:-10 NM_001303104:-10 AB209854:-10 ENST00000376499.8:-22 NM_005077:-22 LF206496:-106 MA442073:-106 BC000228:182 LF355192:286 MA590769:286 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 11: | Line 11: | ||
|entrez_id=7088 | |entrez_id=7088 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=ESG | + | |gene_alias=ESG{{!}}ESG1{{!}}GRG1 |
| − | |gene_description= | + | |gene_description=TLE family member 1, transcriptional corepressor |
|gene_id=7088 | |gene_id=7088 | ||
| − | |gene_name= | + | |gene_name=TLE family member 1, transcriptional corepressor |
|gene_source=HGNC:11837 | |gene_source=HGNC:11837 | ||
|gene_symbol=TLE1 | |gene_symbol=TLE1 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:11837 | |hgnc_mgi_id=HGNC:11837 | ||
|nearest_ensembl=ENSG00000196781 | |nearest_ensembl=ENSG00000196781 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001303103 |
|nearest_refseq=NM_005077 | |nearest_refseq=NM_005077 | ||
|nearest_unigene=Hs.197320 | |nearest_unigene=Hs.197320 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=81689486 | |start=81689486 | ||
|start_of_center_position=81689505 | |start_of_center_position=81689505 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001303104 | + | |transcript_name=NM_001303103 NM_001303104 AB209854 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101122.1 | |tss_id=hg_101122.1 | ||
Revision as of 16:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81689505 |
|---|---|
| End of the center position in the TSS region: | 81689506 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001303103 NM_001303104 AB209854 |
|---|---|
| Distance: | -10 |
| Num_trans: | 10 |
| All_trans: | NM_001303103:-10 NM_001303104:-10 AB209854:-10 ENST00000376499.8:-22 NM_005077:-22 LF206496:-106 MA442073:-106 BC000228:182 LF355192:286 MA590769:286 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_001303103 |
| Entrez ID: | 7088 |
| Nearest Unigene: | Hs.197320 |
| Nearest Refseq: | NM_005077 |
| Nearest Ensembl: | ENSG00000196781 |
| Gene Name: | TLE family member 1, transcriptional corepressor |
| Gene Alias: | ESG|ESG1|GRG1 |
| Gene Description: | TLE family member 1, transcriptional corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
