Difference between revisions of "TSS:Hg 101138.1"
From referenceTSS
Line 3: | Line 3: | ||
|EPB41LO= | |EPB41LO= | ||
|P410= | |P410= | ||
− | |all_trans= | + | |all_trans=ENST00000304195.8:0 NM_001244959:0 NM_174938:0 AK297722:0 AK223597:0 BC041376:-10 EF560742:20 ENST00000376438.5:-118 KJ904084:122 AK094281:170 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
− | |distance_to_tss= | + | |distance_to_tss=35 |
|end=83538428 | |end=83538428 | ||
|end_of_center_position=83538366 | |end_of_center_position=83538366 | ||
|entrez_id=257019 | |entrez_id=257019 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
− | |gene_alias=4.1O | + | |gene_alias=4.1O{{!}}EPB41L4O{{!}}EPB41LO{{!}}P410 |
|gene_description=FERM domain containing 3 | |gene_description=FERM domain containing 3 | ||
|gene_id=257019 | |gene_id=257019 | ||
Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:24125 | |hgnc_mgi_id=HGNC:24125 | ||
|nearest_ensembl=ENSG00000172159 | |nearest_ensembl=ENSG00000172159 | ||
− | |nearest_promoter_id= | + | |nearest_promoter_id=NM_174938 |
|nearest_refseq=NM_174938 | |nearest_refseq=NM_174938 | ||
|nearest_unigene=Hs.127535 | |nearest_unigene=Hs.127535 | ||
− | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=83538303 | |start=83538303 | ||
|start_of_center_position=83538365 | |start_of_center_position=83538365 | ||
|strand=- | |strand=- | ||
− | |transcript_name=AK297722 AK223597 | + | |transcript_name=ENST00000304195.8 NM_001244959 NM_174938 AK297722 AK223597 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101138.1 | |tss_id=hg_101138.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id= | + | |uniprot_id=A2A2Y4 |
}} | }} |
Revision as of 16:33, 15 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 83538365 |
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End of the center position in the TSS region: | 83538366 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000304195.8 NM_001244959 NM_174938 AK297722 AK223597 |
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Distance: | 0 |
Num_trans: | 10 |
All_trans: | ENST00000304195.8:0 NM_001244959:0 NM_174938:0 AK297722:0 AK223597:0 BC041376:-10 EF560742:20 ENST00000376438.5:-118 KJ904084:122 AK094281:170 |
TATA-Box annotation
Distance to TSS: | 35 |
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Nearest PromoterID: | NM_174938 |
Entrez ID: | 257019 |
Nearest Unigene: | Hs.127535 |
Nearest Refseq: | NM_174938 |
Nearest Ensembl: | ENSG00000172159 |
Gene Name: | FERM domain containing 3 |
Gene Alias: | 4.1O|EPB41L4O|EPB41LO|P410 |
Gene Description: | FERM domain containing 3 |
Gene Type: | protein-coding |
CpG%: | 0.145 |
GC%: | 0.766169 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |