Difference between revisions of "TSS:Hg 101190.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NNA1= | |NNA1= | ||
| − | |all_trans=ENST00000376083.7:28 | + | |all_trans=ENST00000376083.7:28 AB028958:-36 ENST00000376081.8:-38 ENST00000357081.8:-104 NM_001330701:-104 AK001544:-124 LP895626:-144 BC060815:-144 ENST00000337006.8:-179 ENST00000628899.1:-179 NM_001286715:-179 NM_001286717:-179 NM_015239:-179 AK295774:-179 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 10: | Line 10: | ||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=CCP1 | + | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 |
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_id=23287 | |gene_id=23287 | ||
| − | |gene_name=ATP/GTP binding | + | |gene_name=ATP/GTP binding carboxypeptidase 1 |
|gene_source=HGNC:17258 | |gene_source=HGNC:17258 | ||
|gene_symbol=AGTPBP1 | |gene_symbol=AGTPBP1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:17258 | |hgnc_mgi_id=HGNC:17258 | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286717 |
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=85741845 | |start=85741845 | ||
|start_of_center_position=85741847 | |start_of_center_position=85741847 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000376083.7 | + | |transcript_name=ENST00000376083.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101190.1 | |tss_id=hg_101190.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R288 | + | |uniprot_id=A0A024R288 |
}} | }} | ||
Revision as of 16:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 85741847 |
|---|---|
| End of the center position in the TSS region: | 85741848 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376083.7 |
|---|---|
| Distance: | 28 |
| Num_trans: | 14 |
| All_trans: | ENST00000376083.7:28 AB028958:-36 ENST00000376081.8:-38 ENST00000357081.8:-104 NM_001330701:-104 AK001544:-124 LP895626:-144 BC060815:-144 ENST00000337006.8:-179 ENST00000628899.1:-179 NM_001286715:-179 NM_001286717:-179 NM_015239:-179 AK295774:-179 |
TATA-Box annotation
| Distance to TSS: | 181 |
|---|---|
| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | ATP/GTP binding carboxypeptidase 1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
