Difference between revisions of "TSS:Hg 101224.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC074809:-304 BC074908:-304 BC132682:-347 BC136586:-347 | + | |all_trans=LF331851:-62 MA567428:-62 BC074809:-304 BC074908:-304 BC132682:-347 BC136586:-347 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance=- | + | |distance=-62 |
| − | |distance_to_tss= | + | |distance_to_tss=996 |
|end=86946517 | |end=86946517 | ||
|end_of_center_position=86946511 | |end_of_center_position=86946511 | ||
| Line 12: | Line 12: | ||
|gene_description=growth arrest specific 1 | |gene_description=growth arrest specific 1 | ||
|gene_id=2619 | |gene_id=2619 | ||
| − | |gene_name= | + | |gene_name=GAS1 |
|gene_source=HGNC:4165 | |gene_source=HGNC:4165 | ||
|gene_symbol=GAS1 | |gene_symbol=GAS1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=86946503 | |start=86946503 | ||
|start_of_center_position=86946510 | |start_of_center_position=86946510 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF331851 MA567428 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101224.1 | |tss_id=hg_101224.1 | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86946510 |
|---|---|
| End of the center position in the TSS region: | 86946511 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF331851 MA567428 |
|---|---|
| Distance: | -62 |
| Num_trans: | 6 |
| All_trans: | LF331851:-62 MA567428:-62 BC074809:-304 BC074908:-304 BC132682:-347 BC136586:-347 |
TATA-Box annotation
| Distance to TSS: | 996 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | GAS1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
