Difference between revisions of "TSS:Hg 101229.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000298743. | + | |all_trans=LF209815:0 MA445392:0 ENST00000298743.9:140 NM_002048:140 LF214003:140 MA449580:140 LF212539:-321 MA448116:-321 L13698:457 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-165 |
|end=86947697 | |end=86947697 | ||
|end_of_center_position=86947672 | |end_of_center_position=86947672 | ||
| Line 12: | Line 12: | ||
|gene_description=growth arrest specific 1 | |gene_description=growth arrest specific 1 | ||
|gene_id=2619 | |gene_id=2619 | ||
| − | |gene_name= | + | |gene_name=GAS1 |
|gene_source=HGNC:4165 | |gene_source=HGNC:4165 | ||
|gene_symbol=GAS1 | |gene_symbol=GAS1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002048 | |nearest_refseq=NM_002048 | ||
|nearest_unigene=Hs.65029 | |nearest_unigene=Hs.65029 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=86947645 | |start=86947645 | ||
|start_of_center_position=86947671 | |start_of_center_position=86947671 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF209815 MA445392 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101229.1 | |tss_id=hg_101229.1 | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86947671 |
|---|---|
| End of the center position in the TSS region: | 86947672 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF209815 MA445392 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | LF209815:0 MA445392:0 ENST00000298743.9:140 NM_002048:140 LF214003:140 MA449580:140 LF212539:-321 MA448116:-321 L13698:457 |
TATA-Box annotation
| Distance to TSS: | -165 |
|---|---|
| Nearest PromoterID: | NM_002048 |
| Entrez ID: | 2619 |
| Nearest Unigene: | Hs.65029 |
| Nearest Refseq: | NM_002048 |
| Nearest Ensembl: | ENSG00000180447 |
| Gene Name: | GAS1 |
| Gene Alias: | - |
| Gene Description: | growth arrest specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
