Difference between revisions of "TSS:Hg 101480.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NINJURIN= | |NINJURIN= | ||
| − | |all_trans=ENST00000375446. | + | |all_trans=BC048212:206 ENST00000375446.5:243 NM_004148:243 BC000298:249 BC004440:250 BC019336:251 ENST00000470314.5:256 U72661:257 U91512:257 ENST00000461162.5:275 ENST00000490564.1:275 BT007164:277 KJ891705:277 KJ897247:277 KR711305:277 CU690562:277 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=206 | |distance=206 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-250 |
|end=93134508 | |end=93134508 | ||
|end_of_center_position=93134501 | |end_of_center_position=93134501 | ||
|entrez_id=4814 | |entrez_id=4814 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=NIN1 | + | |gene_alias=NIN1{{!}}NINJURIN |
|gene_description=ninjurin 1 | |gene_description=ninjurin 1 | ||
|gene_id=4814 | |gene_id=4814 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004148 | |nearest_refseq=NM_004148 | ||
|nearest_unigene=Hs.494457 | |nearest_unigene=Hs.494457 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=93134493 | |start=93134493 | ||
|start_of_center_position=93134500 | |start_of_center_position=93134500 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC048212 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101480.1 | |tss_id=hg_101480.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:41, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93134500 |
|---|---|
| End of the center position in the TSS region: | 93134501 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC048212 |
|---|---|
| Distance: | 206 |
| Num_trans: | 16 |
| All_trans: | BC048212:206 ENST00000375446.5:243 NM_004148:243 BC000298:249 BC004440:250 BC019336:251 ENST00000470314.5:256 U72661:257 U91512:257 ENST00000461162.5:275 ENST00000490564.1:275 BT007164:277 KJ891705:277 KJ897247:277 KR711305:277 CU690562:277 |
TATA-Box annotation
| Distance to TSS: | -250 |
|---|---|
| Nearest PromoterID: | NM_004148 |
| Entrez ID: | 4814 |
| Nearest Unigene: | Hs.494457 |
| Nearest Refseq: | NM_004148 |
| Nearest Ensembl: | ENSG00000131669 |
| Gene Name: | ninjurin 1 |
| Gene Alias: | NIN1|NINJURIN |
| Gene Description: | ninjurin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
