Difference between revisions of "TSS:Hg 101554.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000433644.2:-12 | + | |all_trans=ENST00000433644.2:-12 ENST00000636777.1:32 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100507346 | |gene_description=uncharacterized LOC100507346 | ||
| − | |gene_name= | + | |gene_id=2176 |
| + | |gene_name=FA complementation group C | ||
| + | |gene_source=HGNC:3584 | ||
| + | |gene_symbol=FANCC | ||
| + | |gene_synonyms=FA3 FAC | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:3584 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_038982 | |nearest_promoter_id=NR_038982 | ||
| Line 22: | Line 27: | ||
|start_of_center_position=95426778 | |start_of_center_position=95426778 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000433644.2 | + | |transcript_name=ENST00000433644.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101554.1 | |tss_id=hg_101554.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:42, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95426778 |
|---|---|
| End of the center position in the TSS region: | 95426779 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000433644.2 |
|---|---|
| Distance: | -12 |
| Num_trans: | 2 |
| All_trans: | ENST00000433644.2:-12 ENST00000636777.1:32 |
TATA-Box annotation
| Distance to TSS: | -36830 |
|---|---|
| Nearest PromoterID: | NR_038982 |
| Entrez ID: | 100507346 |
| Nearest Unigene: | Hs.661847 |
| Nearest Refseq: | NR_038982 |
| Nearest Ensembl: | |
| Gene Name: | FA complementation group C |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100507346 |
| Gene Type: | ncRNA |
| CpG%: | 0.09 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
