Difference between revisions of "TSS:Hg 101618.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000607322.1:0 | + | |all_trans=ENST00000607322.1:0 ENST00000662325.1:0 ENST00000366109.2:0 NR_136286:0 AK098764:0 AK309476:0 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=ankyrin repeat domain 18C, pseudogene |
| − | |gene_id= | + | |gene_id=101926917 |
| − | |gene_name= | + | |gene_name=ankyrin repeat domain 18C, pseudogene |
|gene_source=HGNC:43601 | |gene_source=HGNC:43601 | ||
|gene_symbol=ANKRD18CP | |gene_symbol=ANKRD18CP | ||
| Line 27: | Line 27: | ||
|start_of_center_position=97238718 | |start_of_center_position=97238718 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000607322.1 ENST00000366109.2 | + | |transcript_name=ENST00000607322.1 ENST00000662325.1 ENST00000366109.2 NR_136286 AK098764 AK309476 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101618.1 | |tss_id=hg_101618.1 | ||
Revision as of 16:44, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 97238718 |
|---|---|
| End of the center position in the TSS region: | 97238719 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000607322.1 ENST00000662325.1 ENST00000366109.2 NR_136286 AK098764 AK309476 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000607322.1:0 ENST00000662325.1:0 ENST00000366109.2:0 NR_136286:0 AK098764:0 AK309476:0 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NR_136286 |
| Entrez ID: | 101926917 |
| Nearest Unigene: | Hs.638367 |
| Nearest Refseq: | NR_136286 |
| Nearest Ensembl: | |
| Gene Name: | ankyrin repeat domain 18C, pseudogene |
| Gene Alias: | - |
| Gene Description: | ankyrin repeat domain 18C, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.035 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
