Difference between revisions of "TSS:Hg 101672.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_033219: | + | |all_trans=AK055833:101 ENST00000341469.7:172 NM_033219:172 NM_014788:172 AK292825:174 ENST00000475147.1:182 ENST00000375098.7:184 BC006333:188 LF385385:188 MA620962:188 ENST00000342043.3:196 AF220130:196 AF220131:196 D50919:196 DQ893293:206 DQ896623:206 AB529155:206 ENST00000478401.1:258 AK097480:469 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=101 |
| − | |distance_to_tss=- | + | |distance_to_tss=-177 |
|end=98119404 | |end=98119404 | ||
|end_of_center_position=98119399 | |end_of_center_position=98119399 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014788 | |nearest_refseq=NM_014788 | ||
|nearest_unigene=Hs.575631 | |nearest_unigene=Hs.575631 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=98119393 | |start=98119393 | ||
|start_of_center_position=98119398 | |start_of_center_position=98119398 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK055833 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101672.1 | |tss_id=hg_101672.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:45, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 98119398 |
|---|---|
| End of the center position in the TSS region: | 98119399 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK055833 |
|---|---|
| Distance: | 101 |
| Num_trans: | 19 |
| All_trans: | AK055833:101 ENST00000341469.7:172 NM_033219:172 NM_014788:172 AK292825:174 ENST00000475147.1:182 ENST00000375098.7:184 BC006333:188 LF385385:188 MA620962:188 ENST00000342043.3:196 AF220130:196 AF220131:196 D50919:196 DQ893293:206 DQ896623:206 AB529155:206 ENST00000478401.1:258 AK097480:469 |
TATA-Box annotation
| Distance to TSS: | -177 |
|---|---|
| Nearest PromoterID: | NM_014788 |
| Entrez ID: | 9830 |
| Nearest Unigene: | Hs.575631 |
| Nearest Refseq: | NM_014788 |
| Nearest Ensembl: | ENSG00000106785 |
| Gene Name: | tripartite motif containing 14 |
| Gene Alias: | - |
| Gene Description: | tripartite motif containing 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
